FFCP PHASE1:Hg19::chr9:27109480..27109485,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:27109480..27109485,+ to FFCP PHASE1:Hg19::chr9:27109480..27109485,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7010 | |EntrezGene=7010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11724 | |HGNC=11724 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIV9 | |UniProt=E5RIV9 | ||
|association_with_transcript=29bp_to_ENST00000519080_5end | |||
|cluster_id=chr9:27109480..27109485,+ | |||
|description=CAGE_peak_7_at_TEK_5end | |||
|id=chr9:27109480..27109485,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.61e-17!24;CL:0000115!1.78e-14!35;CL:1000413!7.19e-13!9;CL:0000071!4.51e-12!18;CL:0002546!4.51e-12!18;CL:0002078!3.39e-11!44;CL:0002544!2.91e-09!6;CL:0000213!5.60e-09!57;CL:0000215!5.60e-09!57;CL:0000222!5.46e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002195;2.20e-24;2!CL:0002571;2.20e-24;2!CL:0000511;6.82e-13;1!CL:0002625;6.82e-13;1!CL:0000216;6.82e-13;1!CL:0000115;3.34e-09;36!CL:0002138;1.22e-08;6!CL:0002139;6.08e-08;24!CL:0002078;8.59e-08;45!CL:0002262;2.82e-07;2!CL:1000398;2.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.45e-24,2;CL:0002571,1.45e-24,2;CL:0000511,4.77e-13,1;CL:0002625,4.77e-13,1;CL:0000216,4.77e-13,1;CL:0000115,2.41e-11,36;CL:0000213,2.92e-09,58;CL:0000215,2.92e-09,58;CL:0002078,5.28e-09,45;CL:0005020,1.17e-08,6;CL:0002138,1.17e-08,6;CL:0005022,1.17e-08,6;CL:0002139,6.08e-08,24;CL:0002262,2.91e-07,2;CL:1000398,2.91e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;1.22e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.21e-34!115;UBERON:0004111!8.32e-22!241;UBERON:0000477!1.57e-20!286;UBERON:0000025!1.83e-20!194;UBERON:0004872!3.22e-16!84;UBERON:0000483!6.45e-16!309;UBERON:0000119!1.61e-15!312;UBERON:0003915!7.19e-13!9;UBERON:0004700!7.19e-13!9;UBERON:0001917!7.19e-13!9;UBERON:0001009!9.72e-13!113;UBERON:0000055!1.12e-12!69;UBERON:0001986!4.51e-12!18;UBERON:0004638!4.51e-12!18;UBERON:0004852!4.51e-12!18;UBERON:0004535!9.95e-12!110;UBERON:0002049!1.83e-11!79;UBERON:0007798!1.83e-11!79;UBERON:0003914!2.80e-11!118;UBERON:0000487!5.81e-11!22;UBERON:0001049!1.16e-10!57;UBERON:0005068!1.16e-10!57;UBERON:0006241!1.16e-10!57;UBERON:0007135!1.16e-10!57;UBERON:0006914!1.95e-10!25;UBERON:0001981!3.54e-10!60;UBERON:0007500!3.54e-10!60;UBERON:0004537!3.54e-10!60;UBERON:0006965!3.54e-10!60;UBERON:0003075!2.61e-09!86;UBERON:0007284!2.61e-09!86;UBERON:0002616!3.69e-09!59;UBERON:0003080!7.42e-09!42;UBERON:0002346!1.67e-08!90;UBERON:0007100!1.98e-08!27;UBERON:0000467!4.27e-08!625;UBERON:0000480!4.97e-08!626;UBERON:0002780!5.24e-08!41;UBERON:0001890!5.24e-08!41;UBERON:0006240!5.24e-08!41;UBERON:0000468!1.21e-07!659;UBERON:0001017!1.72e-07!82;UBERON:0005743!1.76e-07!86;UBERON:0002020!2.17e-07!34;UBERON:0003528!2.17e-07!34;UBERON:0000955!2.63e-07!69;UBERON:0006238!2.63e-07!69;UBERON:0001637!2.64e-07!42;UBERON:0003509!2.64e-07!42;UBERON:0004572!2.64e-07!42;UBERON:0000948!3.25e-07!24;UBERON:0005498!3.25e-07!24;UBERON:0004140!3.25e-07!24;UBERON:0009881!3.25e-07!24;UBERON:0004141!3.25e-07!24;UBERON:0003084!3.25e-07!24;UBERON:0007005!3.25e-07!24;UBERON:0004139!3.25e-07!24;UBERON:0004291!3.25e-07!24;UBERON:0001893!3.32e-07!34;UBERON:0003103!6.04e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.78e-13;1!UBERON:0006518;2.78e-13;1!UBERON:0008949;2.78e-13;1!UBERON:0000101;2.78e-13;1!UBERON:0002167;2.78e-13;1!UBERON:0002038;6.82e-13;1!UBERON:0001136;6.82e-13;1!UBERON:0001343;6.82e-13;1!UBERON:0009661;6.82e-13;1!UBERON:0002950;6.82e-13;1!UBERON:0004910;6.82e-13;1!UBERON:0004813;6.82e-13;1!UBERON:0001891;6.82e-13;1!UBERON:0001281;2.82e-07;2!UBERON:0003497;2.82e-07;2!UBERON:0003909;2.82e-07;2!UBERON:0003835;2.82e-07;2!UBERON:0004909;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.32e-13,1;UBERON:0006518,2.32e-13,1;UBERON:0008949,2.32e-13,1;UBERON:0000101,2.32e-13,1;UBERON:0002167,2.32e-13,1;UBERON:0001136,4.77e-13,1;UBERON:0001343,4.77e-13,1;UBERON:0004910,4.77e-13,1;UBERON:0005154,4.77e-13,1;UBERON:0005295,4.77e-13,1;UBERON:0004813,4.77e-13,1;UBERON:0005297,4.77e-13,1;UBERON:0005294,4.77e-13,1;UBERON:0010141,4.77e-13,1;UBERON:0005891,4.77e-13,1;UBERON:0002038,1.09e-12,1;UBERON:0009661,1.09e-12,1;UBERON:0002950,1.09e-12,1;UBERON:0001891,1.09e-12,1;UBERON:0009616,1.09e-12,1;UBERON:0010286,1.09e-12,1;UBERON:0004111,1.20e-07,240;UBERON:0001281,2.91e-07,2;UBERON:0003497,2.91e-07,2;UBERON:0003909,2.91e-07,2;UBERON:0003835,2.91e-07,2;UBERON:0004909,3.70e-07,2 | |||
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| ||
|short_description=p7@TEK | |||
}} | }} |
Latest revision as of 00:58, 17 September 2015
Short description: | p7@TEK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TEK_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000519080_5end |
EntrezGene: | TEK |
HGNC: | 11724 |
UniProt: | E5RIV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.45e-24 | 2 |
hepatic mesenchymal stem cell | 1.45e-24 | 2 |
androgen binding protein secreting cell | 4.77e-13 | 1 |
seminiferous tubule epithelial cell | 4.77e-13 | 1 |
Sertoli cell | 4.77e-13 | 1 |
endothelial cell | 2.41e-11 | 36 |
lining cell | 2.92e-09 | 58 |
barrier cell | 2.92e-09 | 58 |
meso-epithelial cell | 5.28e-09 | 45 |
lymphangioblast | 1.17e-08 | 6 |
endothelial cell of lymphatic vessel | 1.17e-08 | 6 |
vascular lymphangioblast | 1.17e-08 | 6 |
endothelial cell of vascular tree | 6.08e-08 | 24 |
endothelial cell of sinusoid | 2.91e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.32e-13 | 1 |
right lung lobe | 2.32e-13 | 1 |
lower lobe of lung | 2.32e-13 | 1 |
lobe of lung | 2.32e-13 | 1 |
right lung | 2.32e-13 | 1 |
mesothelium | 4.77e-13 | 1 |
seminiferous tubule of testis | 4.77e-13 | 1 |
epithelium of male gonad | 4.77e-13 | 1 |
epithelial cord | 4.77e-13 | 1 |
sex cord | 4.77e-13 | 1 |
seminiferous tubule epithelium | 4.77e-13 | 1 |
testis sex cord | 4.77e-13 | 1 |
genital ridge | 4.77e-13 | 1 |
primitive sex cord of indifferent gonad | 4.77e-13 | 1 |
coelomic epithelium | 4.77e-13 | 1 |
substantia nigra | 1.09e-12 | 1 |
midbrain nucleus | 1.09e-12 | 1 |
regional part of midbrain | 1.09e-12 | 1 |
midbrain | 1.09e-12 | 1 |
presumptive midbrain | 1.09e-12 | 1 |
midbrain neural tube | 1.09e-12 | 1 |
anatomical conduit | 1.20e-07 | 240 |
hepatic sinusoid | 2.91e-07 | 2 |
abdomen blood vessel | 2.91e-07 | 2 |
sinusoid | 2.91e-07 | 2 |
abdominal segment blood vessel | 2.91e-07 | 2 |
epithelium of gonad | 3.70e-07 | 2 |