FFCP PHASE1:Hg19::chr7:14880892..14880938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1607 | |EntrezGene=1607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2850 | |HGNC=2850 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000406247_5end | |association_with_transcript=33bp_to_ENST00000406247_5end | ||
|cluster_id=chr7:14880892..14880938,- | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_16_at_DGKB_5end | |description=CAGE_peak_16_at_DGKB_5end | ||
|id=chr7:14880892..14880938,- | |id=chr7:14880892..14880938,- | ||
|ontology_enrichment_celltype=CL:0002536!1.27e-10!2;CL:0002537!1.85e-09!5 | |ontology_enrichment_celltype=CL:0002536!1.27e-10!2;CL:0002537!1.85e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;7.37e-60;5!CL:0000349;2.32e-28;19!CL:0002577;2.31e-12;3!CL:0000197;9.23e-07;6!CL:0000098;9.23e-07;6!CL:0002167;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.37e-60,5;CL:0000349,2.32e-28,19;CL:0002577,2.31e-12,3;CL:0000197,9.49e-07,6;CL:0000098,9.49e-07,6;CL:0002167,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.41e-20!14;UBERON:0000158!1.41e-20!14;UBERON:0000305!2.61e-17!7;UBERON:0004871!4.15e-15!8;UBERON:0002780!1.61e-12!41;UBERON:0001890!1.61e-12!41;UBERON:0006240!1.61e-12!41;UBERON:0003080!3.58e-12!42;UBERON:0001049!9.34e-12!57;UBERON:0005068!9.34e-12!57;UBERON:0006241!9.34e-12!57;UBERON:0007135!9.34e-12!57;UBERON:0000478!1.93e-11!24;UBERON:0002616!2.89e-11!59;UBERON:0000955!1.58e-10!69;UBERON:0006238!1.58e-10!69;UBERON:0002020!1.81e-10!34;UBERON:0003528!1.81e-10!34;UBERON:0003075!2.50e-09!86;UBERON:0007284!2.50e-09!86;UBERON:0001950!3.46e-09!20;UBERON:0003056!3.91e-09!61;UBERON:0001869!4.66e-09!32;UBERON:0001871!6.52e-09!7;UBERON:0002346!9.03e-09!90;UBERON:0002791!9.52e-09!33;UBERON:0001893!1.87e-08!34;UBERON:0001017!2.05e-08!82;UBERON:0002619!2.60e-08!22;UBERON:0005743!6.83e-08!86;UBERON:0004121!1.53e-07!169;UBERON:0000924!2.90e-07!173;UBERON:0006601!2.90e-07!173;UBERON:0000956!3.00e-07!25;UBERON:0000203!3.00e-07!25;UBERON:0007023!3.63e-07!115;UBERON:0002771!6.75e-07!3;UBERON:0000073!7.02e-07!94;UBERON:0001016!7.02e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.53e-43;7!UBERON:0005631;1.86e-30;10!UBERON:0000158;1.86e-30;10!UBERON:0000478;1.30e-22;24!UBERON:0001987;1.32e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,4.53e-43,7;UBERON:0005631,3.38e-38,14;UBERON:0000158,3.38e-38,14;UBERON:0004871,8.09e-38,8;UBERON:0000478,1.30e-22,24;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0004923,1.32e-08,66 | |||
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| ||
|short_description=p16@DGKB | |short_description=p16@DGKB | ||
}} | }} |
Latest revision as of 01:12, 17 September 2015
Short description: | p16@DGKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DGKB_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | 33bp_to_ENST00000406247_5end |
EntrezGene: | DGKB |
HGNC: | 2850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.37e-60 | 5 |
extraembryonic cell | 2.32e-28 | 19 |
placental epithelial cell | 2.31e-12 | 3 |
receptor cell | 9.49e-07 | 6 |
sensory epithelial cell | 9.49e-07 | 6 |
olfactory epithelial cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
amnion | 4.53e-43 | 7 |
extraembryonic membrane | 3.38e-38 | 14 |
membranous layer | 3.38e-38 | 14 |
somatic layer of lateral plate mesoderm | 8.09e-38 | 8 |
extraembryonic structure | 1.30e-22 | 24 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
organ component layer | 1.32e-08 | 66 |