FFCP PHASE1:Hg19::chr7:148844498..148844507,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18373 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TD17 | |||
|association_with_transcript=-52bp_to_ENST00000420008,NM_170686,uc003wfl.2_5end | |||
|cluster_id=chr7:148844498..148844507,+ | |||
|description=CAGE_peak_6_at_ZNF398_5end | |||
|id=chr7:148844498..148844507,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.36e-22;5!CL:0002321;2.45e-07;15!CL:0000540;2.48e-07;6!CL:0000404;2.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.79e-23,5;CL:0000540,1.92e-07,6;CL:0000031,1.92e-07,6;CL:0000404,1.92e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.48e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!4.31e-09!20;UBERON:0002619!1.09e-08!22;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0001869!2.38e-08!32;UBERON:0001017!2.70e-08!82;UBERON:0001893!4.58e-08!34;UBERON:0001049!8.34e-08!57;UBERON:0005068!8.34e-08!57;UBERON:0006241!8.34e-08!57;UBERON:0007135!8.34e-08!57;UBERON:0002791!8.98e-08!33;UBERON:0002616!9.27e-08!59;UBERON:0005743!1.15e-07!86;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0000955!4.76e-07!69;UBERON:0006238!4.76e-07!69;UBERON:0000073!4.82e-07!94;UBERON:0001016!4.82e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;2.10e-10;6!UBERON:0001876;1.02e-09;2!UBERON:0002791;1.42e-09;32!UBERON:0001950;1.58e-09;20!UBERON:0001869;3.84e-09;32!UBERON:0002619;1.29e-08;22!UBERON:0000922;2.52e-08;49!UBERON:0003528;4.25e-08;34!UBERON:0002020;4.25e-08;34!UBERON:0002420;6.27e-08;9!UBERON:0007245;6.27e-08;9!UBERON:0010009;6.27e-08;9!UBERON:0010011;6.27e-08;9!UBERON:0000454;6.27e-08;9!UBERON:0001893;6.31e-08;34!UBERON:0000956;1.64e-07;25!UBERON:0000203;1.64e-07;25!UBERON:0005383;9.54e-07;3!UBERON:0005382;9.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,1.16e-10,6;UBERON:0001876,2.55e-10,2;UBERON:0001017,2.88e-10,81;UBERON:0001950,8.51e-10,20;UBERON:0002791,1.37e-09,32;UBERON:0001869,1.37e-09,32;UBERON:0003528,6.00e-09,34;UBERON:0002020,6.00e-09,34;UBERON:0001893,6.00e-09,34;UBERON:0001016,6.43e-09,89;UBERON:0002619,7.39e-09,22;UBERON:0002780,7.53e-09,41;UBERON:0001890,7.53e-09,41;UBERON:0003080,7.53e-09,41;UBERON:0006240,7.53e-09,41;UBERON:0002420,2.92e-08,9;UBERON:0007245,2.92e-08,9;UBERON:0010009,2.92e-08,9;UBERON:0010011,2.92e-08,9;UBERON:0000454,2.92e-08,9;UBERON:0000073,6.75e-08,53;UBERON:0002616,6.75e-08,53;UBERON:0003056,7.19e-08,61;UBERON:0000956,1.01e-07,25;UBERON:0000203,1.01e-07,25;UBERON:0001049,2.27e-07,56;UBERON:0005068,2.27e-07,56;UBERON:0006241,2.27e-07,56;UBERON:0007135,2.27e-07,56;UBERON:0005383,7.17e-07,3;UBERON:0005382,7.17e-07,3;UBERON:0000955,7.97e-07,68;UBERON:0006238,7.97e-07,68 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0.527533956456907,0,0,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0.229240217243854,0.164201178899891,0.157421562627358,0.393364276848904,0,0,0,0,0.739508020333575,0.232401601740905,0.426507697462265,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,1.04047478047903,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,1.04535523804977,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,1.34140171940727,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0,0.283604451492204,0,0.087834785693126,0.589405839739707,0,0,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,1.09921046358244,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0.597794722207204,0,0,0.140450806702248,0.61246251376468,0,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0.877955241761676,0,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0.900273288253207,0.103052529238439,0,0.37223371266318,0.675105328965065,0.292311015483596,0.252433774244115,0.460249493211497,0.161646056818812,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,3.41526377162867,1.45782745153634,2.32387885739037,1.55491582523056,1.7662459561294,1.09493207722749,1.56449532329816,0.643240938192885,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,1.03993478527958,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0,0,0,0.492434012174795,0.468008530278475,0.743155811443641,0.93733833986777,0.839910640994298,0,0.0895585227028483,0,0,0,0.352193736052904,0.207328115540772,0.720599767084807,0.50496973370552,0.444485260045183,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.66004457238855,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0.65147236858747,0,0,0,0,0.399891964728228,1.2162378064119,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0.385029108839245,0.76228387266739,0,0.773288812777695,0.335032530668698,0,0.749007023947182,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.468565659970853,0.601892199455438,0,1.03473071292505,0.664225598535437,0.553107505625109,0.173767228936166,0.195801157462741,0,0.206768026122887,0,0.320182673410333,0,1.66435439510497,0.604780586659361,0.496215615637554,0.61384789315225,0,0.128139149255701,0,0,0,0,0.355123450626254,0.164254312027618,0,0,0.120859449591622,0.40101294060657,0.552485933615378,0.34444334449382,0,0.524497659837696,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0.457847324091717,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0.445160178233687,0.165284915360978,0.768760269460425,0.510450849978337,0.4046311234222,0.464845549297286,0,2.0911118104818,0,0.532306030317022,0,0.55597265731176,0.572499546967965,0,0,0.190630193923825,0.511795582622668,0.42793898803392,0.95460974377781,0.78494864019923,0,0,0.117812402345686,0.808729926293264,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,0.845086807596724,0.286822704408103,0.392996164052485,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0.384888450902048,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0.764637207142375,1.13929437434833,1.19115887728894,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0.284567373393656,0.318852545457645,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0.481764225311099,0.201799707191048,0,0,0,0,0.333698283423817,0.390776190804081,0.556812347790485,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0.606802608747567,0.55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| |||
|short_description=p6@ZNF398 | |||
}} |
Latest revision as of 01:16, 17 September 2015
Short description: | p6@ZNF398 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZNF398_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_ENST00000420008, NM_170686, uc003wfl.2_5end |
EntrezGene: | ZNF398 |
HGNC: | 18373 |
UniProt: | Q8TD17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.79e-23 | 5 |
neuron | 1.92e-07 | 6 |
neuroblast | 1.92e-07 | 6 |
electrically signaling cell | 1.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 1.16e-10 | 6 |
amygdala | 2.55e-10 | 2 |
central nervous system | 2.88e-10 | 81 |
neocortex | 8.51e-10 | 20 |
regional part of telencephalon | 1.37e-09 | 32 |
cerebral hemisphere | 1.37e-09 | 32 |
brain grey matter | 6.00e-09 | 34 |
gray matter | 6.00e-09 | 34 |
telencephalon | 6.00e-09 | 34 |
nervous system | 6.43e-09 | 89 |
regional part of cerebral cortex | 7.39e-09 | 22 |
regional part of forebrain | 7.53e-09 | 41 |
forebrain | 7.53e-09 | 41 |
anterior neural tube | 7.53e-09 | 41 |
future forebrain | 7.53e-09 | 41 |
basal ganglion | 2.92e-08 | 9 |
nuclear complex of neuraxis | 2.92e-08 | 9 |
aggregate regional part of brain | 2.92e-08 | 9 |
collection of basal ganglia | 2.92e-08 | 9 |
cerebral subcortex | 2.92e-08 | 9 |
regional part of nervous system | 6.75e-08 | 53 |
regional part of brain | 6.75e-08 | 53 |
pre-chordal neural plate | 7.19e-08 | 61 |
cerebral cortex | 1.01e-07 | 25 |
pallium | 1.01e-07 | 25 |
neural tube | 2.27e-07 | 56 |
neural rod | 2.27e-07 | 56 |
future spinal cord | 2.27e-07 | 56 |
neural keel | 2.27e-07 | 56 |
caudate-putamen | 7.17e-07 | 3 |
dorsal striatum | 7.17e-07 | 3 |
brain | 7.97e-07 | 68 |
future brain | 7.97e-07 | 68 |