FFCP PHASE1:Hg19::chr1:151881949..151881970,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:151881949..151881970,- to FFCP PHASE1:Hg19::chr1:151881949..151881970,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117145 | |EntrezGene=117145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17947 | |HGNC=17947 | ||
|TSSclassifier=strong | |||
|UniProt=F6XC58 | |UniProt=F6XC58 | ||
|association_with_transcript=7bp_to_ENST00000471464_5end | |||
|cluster_id=chr1:151881949..151881970,- | |||
|coexpression_cluster_id=C3865 | |||
|description=CAGE_peak_3_at_THEM4_5end | |||
|id=chr1:151881949..151881970,- | |||
|ontology_enrichment_celltype=CL:0000791!4.96e-11!18;CL:0000789!4.96e-11!18;CL:0002420!4.96e-11!18;CL:0002419!4.96e-11!18;CL:0000790!4.96e-11!18;CL:0000625!2.56e-08!11;CL:0000084!2.20e-07!25;CL:0000827!2.20e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.12e-11;18!CL:0000789;2.12e-11;18!CL:0002419;2.12e-11;18!CL:0000625;1.42e-08;11!CL:0000084;1.07e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.59e-11,18;CL:0000789,4.59e-11,18;CL:0002420,4.59e-11,18;CL:0002419,4.59e-11,18;CL:0000790,4.59e-11,18;CL:0000625,2.42e-08,11;CL:0000084,1.75e-07,25;CL:0000827,1.75e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.12e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.65e-11!115;UBERON:0000178!6.21e-08!15;UBERON:0000179!6.21e-08!15;UBERON:0000463!6.21e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.84e-08;15!UBERON:0000179;6.84e-08;15!UBERON:0000463;6.84e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-10,114;UBERON:0000178,5.89e-08,15;UBERON:0000179,5.89e-08,15;UBERON:0000463,5.89e-08,15 | |||
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| ||
|short_description=p3@THEM4 | |||
}} | }} |
Latest revision as of 01:52, 17 September 2015
Short description: | p3@THEM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_THEM4_5end |
Coexpression cluster: | C3865_melanoma_CD4_anaplastic_choriocarcinoma_teratocarcinoma_lymphangiectasia_CD8 |
Association with transcript: | 7bp_to_ENST00000471464_5end |
EntrezGene: | THEM4 |
HGNC: | 17947 |
UniProt: | F6XC58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.59e-11 | 18 |
alpha-beta T cell | 4.59e-11 | 18 |
immature T cell | 4.59e-11 | 18 |
mature T cell | 4.59e-11 | 18 |
immature alpha-beta T cell | 4.59e-11 | 18 |
CD8-positive, alpha-beta T cell | 2.42e-08 | 11 |
T cell | 1.75e-07 | 25 |
pro-T cell | 1.75e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-10 | 114 |
blood | 5.89e-08 | 15 |
haemolymphatic fluid | 5.89e-08 | 15 |
organism substance | 5.89e-08 | 15 |