FFCP PHASE1:Hg19::chr4:185726906..185726918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2180 | |EntrezGene=2180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3569 | |HGNC=3569 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z452 | |UniProt=B7Z452 | ||
|association_with_transcript=23bp_to_ENST00000513317,uc003iww.2_5end | |association_with_transcript=23bp_to_ENST00000513317,uc003iww.2_5end | ||
|cluster_id=chr4:185726906..185726918,- | |||
|description=CAGE_peak_10_at_ACSL1_5end | |description=CAGE_peak_10_at_ACSL1_5end | ||
|id=chr4:185726906..185726918,- | |id=chr4:185726906..185726918,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.99e-12;19!CL:0002536;1.90e-11;2!CL:0002537;2.23e-09;5!CL:0002577;3.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.83e-12,19;CL:0002536,2.01e-11,2;CL:0002537,2.52e-09,5;CL:0002577,1.39e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.43e-07;3!UBERON:0003057;1.43e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.10e-23!115;UBERON:0000475!1.19e-15!365;UBERON:0000153!4.80e-14!129;UBERON:0007811!4.80e-14!129;UBERON:0004121!7.94e-14!169;UBERON:0000033!2.36e-13!123;UBERON:0000924!4.66e-13!173;UBERON:0006601!4.66e-13!173;UBERON:0001049!1.48e-12!57;UBERON:0005068!1.48e-12!57;UBERON:0006241!1.48e-12!57;UBERON:0007135!1.48e-12!57;UBERON:0000064!2.07e-12!219;UBERON:0000062!2.06e-11!511;UBERON:0003075!1.66e-10!86;UBERON:0007284!1.66e-10!86;UBERON:0002298!3.32e-10!8;UBERON:0002616!1.14e-09!59;UBERON:0002346!1.54e-09!90;UBERON:0002020!1.89e-08!34;UBERON:0003528!1.89e-08!34;UBERON:0000955!2.23e-08!69;UBERON:0006238!2.23e-08!69;UBERON:0005743!2.72e-08!86;UBERON:0001893!2.81e-08!34;UBERON:0000481!5.40e-08!347;UBERON:0001017!7.51e-08!82;UBERON:0000073!9.31e-08!94;UBERON:0001016!9.31e-08!94;UBERON:0002791!1.18e-07!33;UBERON:0003080!1.65e-07!42;UBERON:0003056!2.46e-07!61;UBERON:0000468!2.63e-07!659;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0002050!3.59e-07!605;UBERON:0005423!3.59e-07!605;UBERON:0000922!5.10e-07!612;UBERON:0003076!5.40e-07!15;UBERON:0003057!5.40e-07!15;UBERON:0002780!6.66e-07!41;UBERON:0001890!6.66e-07!41;UBERON:0006240!6.66e-07!41;UBERON:0001869!7.34e-07!32;UBERON:0000467!9.88e-07!625 | |ontology_enrichment_uberon=UBERON:0007023!4.10e-23!115;UBERON:0000475!1.19e-15!365;UBERON:0000153!4.80e-14!129;UBERON:0007811!4.80e-14!129;UBERON:0004121!7.94e-14!169;UBERON:0000033!2.36e-13!123;UBERON:0000924!4.66e-13!173;UBERON:0006601!4.66e-13!173;UBERON:0001049!1.48e-12!57;UBERON:0005068!1.48e-12!57;UBERON:0006241!1.48e-12!57;UBERON:0007135!1.48e-12!57;UBERON:0000064!2.07e-12!219;UBERON:0000062!2.06e-11!511;UBERON:0003075!1.66e-10!86;UBERON:0007284!1.66e-10!86;UBERON:0002298!3.32e-10!8;UBERON:0002616!1.14e-09!59;UBERON:0002346!1.54e-09!90;UBERON:0002020!1.89e-08!34;UBERON:0003528!1.89e-08!34;UBERON:0000955!2.23e-08!69;UBERON:0006238!2.23e-08!69;UBERON:0005743!2.72e-08!86;UBERON:0001893!2.81e-08!34;UBERON:0000481!5.40e-08!347;UBERON:0001017!7.51e-08!82;UBERON:0000073!9.31e-08!94;UBERON:0001016!9.31e-08!94;UBERON:0002791!1.18e-07!33;UBERON:0003080!1.65e-07!42;UBERON:0003056!2.46e-07!61;UBERON:0000468!2.63e-07!659;UBERON:0000923!3.03e-07!604;UBERON:0005291!3.03e-07!604;UBERON:0006598!3.03e-07!604;UBERON:0002532!3.03e-07!604;UBERON:0002050!3.59e-07!605;UBERON:0005423!3.59e-07!605;UBERON:0000922!5.10e-07!612;UBERON:0003076!5.40e-07!15;UBERON:0003057!5.40e-07!15;UBERON:0002780!6.66e-07!41;UBERON:0001890!6.66e-07!41;UBERON:0006240!6.66e-07!41;UBERON:0001869!7.34e-07!32;UBERON:0000467!9.88e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;8.73e-18;7!UBERON:0002298;7.61e-13;6!UBERON:0005631;2.27e-12;10!UBERON:0000158;2.27e-12;10!UBERON:0002148;1.84e-10;2!UBERON:0006331;1.84e-10;2!UBERON:0009662;1.84e-10;2!UBERON:0000478;3.67e-09;24!UBERON:0004732;6.41e-09;13!UBERON:0000125;1.34e-08;9!UBERON:0002308;1.34e-08;9!UBERON:0002240;1.43e-07;3!UBERON:0005174;1.43e-07;3!UBERON:0001137;1.43e-07;3!UBERON:0000988;3.00e-07;3!UBERON:0001896;3.00e-07;3!UBERON:0005290;3.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.05e-17,7;UBERON:0005631,1.41e-16,14;UBERON:0000158,1.41e-16,14;UBERON:0004871,1.84e-15,8;UBERON:0002298,7.92e-13,6;UBERON:0003076,5.45e-11,15;UBERON:0003057,5.45e-11,15;UBERON:0002148,2.47e-10,2;UBERON:0006331,2.47e-10,2;UBERON:0009662,2.47e-10,2;UBERON:0000478,2.88e-09,24;UBERON:0004732,6.02e-09,13;UBERON:0000125,1.52e-08,9;UBERON:0002308,1.52e-08,9;UBERON:0002240,1.49e-07,3;UBERON:0005174,1.49e-07,3;UBERON:0001137,1.49e-07,3;UBERON:0004121,1.52e-07,171;UBERON:0000924,1.52e-07,171;UBERON:0006601,1.52e-07,171;UBERON:0001896,2.57e-07,3;UBERON:0005290,2.57e-07,3;UBERON:0010096,2.57e-07,3;UBERON:0000988,3.65e-07,3;UBERON:0011216,8.83e-07,223 | |||
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| ||
|short_description=p10@ACSL1 | |short_description=p10@ACSL1 | ||
}} | }} |
Latest revision as of 01:55, 17 September 2015
Short description: | p10@ACSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ACSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000513317, uc003iww.2_5end |
EntrezGene: | ACSL1 |
HGNC: | 3569 |
UniProt: | B7Z452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.83e-12 | 19 |
amniotic epithelial cell | 2.01e-11 | 2 |
amnion mesenchymal stem cell | 2.52e-09 | 5 |
placental epithelial cell | 1.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.05e-17 | 7 |
extraembryonic membrane | 1.41e-16 | 14 |
membranous layer | 1.41e-16 | 14 |
somatic layer of lateral plate mesoderm | 1.84e-15 | 8 |
brainstem | 7.92e-13 | 6 |
posterior neural tube | 5.45e-11 | 15 |
chordal neural plate | 5.45e-11 | 15 |
locus ceruleus | 2.47e-10 | 2 |
brainstem nucleus | 2.47e-10 | 2 |
hindbrain nucleus | 2.47e-10 | 2 |
extraembryonic structure | 2.88e-09 | 24 |
segmental subdivision of nervous system | 6.02e-09 | 13 |
neural nucleus | 1.52e-08 | 9 |
nucleus of brain | 1.52e-08 | 9 |
spinal cord | 1.49e-07 | 3 |
dorsal region element | 1.49e-07 | 3 |
dorsum | 1.49e-07 | 3 |
ectoderm-derived structure | 1.52e-07 | 171 |
ectoderm | 1.52e-07 | 171 |
presumptive ectoderm | 1.52e-07 | 171 |
medulla oblongata | 2.57e-07 | 3 |
myelencephalon | 2.57e-07 | 3 |
future myelencephalon | 2.57e-07 | 3 |
pons | 3.65e-07 | 3 |
organ system subdivision | 8.83e-07 | 223 |