FFCP PHASE1:Hg19::chr1:25071930..25071944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25932 | |EntrezGene=25932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13518 | |HGNC=13518 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000489758_5end | |association_with_transcript=30bp_to_ENST00000489758_5end | ||
|cluster_id=chr1:25071930..25071944,+ | |||
|coexpression_cluster_id=C3110 | |coexpression_cluster_id=C3110 | ||
|description=CAGE_peak_1_at_CLIC4_5end | |description=CAGE_peak_1_at_CLIC4_5end | ||
|id=chr1:25071930..25071944,+ | |id=chr1:25071930..25071944,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.14e-34!180;CL:0000222!2.26e-20!119;CL:0000057!2.93e-19!75;CL:0000680!7.39e-16!57;CL:0000056!7.39e-16!57;CL:0000355!7.39e-16!57;CL:0000187!2.03e-14!54;CL:0000183!7.61e-13!59;CL:0000393!5.79e-12!60;CL:0000211!5.79e-12!60;CL:0000192!1.15e-11!42;CL:0000514!1.15e-11!42;CL:0000359!4.74e-11!32;CL:0000220!5.57e-11!246;CL:0002321!5.67e-11!248;CL:0002620!4.36e-08!23;CL:0002334!8.69e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.14e-34!180;CL:0000222!2.26e-20!119;CL:0000057!2.93e-19!75;CL:0000680!7.39e-16!57;CL:0000056!7.39e-16!57;CL:0000355!7.39e-16!57;CL:0000187!2.03e-14!54;CL:0000183!7.61e-13!59;CL:0000393!5.79e-12!60;CL:0000211!5.79e-12!60;CL:0000192!1.15e-11!42;CL:0000514!1.15e-11!42;CL:0000359!4.74e-11!32;CL:0000220!5.57e-11!246;CL:0002321!5.67e-11!248;CL:0002620!4.36e-08!23;CL:0002334!8.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.10e-10;32!CL:0000192;5.47e-09;43!CL:0000187;2.67e-08;55!CL:0000057;3.79e-08;73!CL:0000134;4.36e-08;55!CL:0002620;4.38e-08;23!CL:0000048;6.49e-07;58!CL:0000393;7.86e-07;61!CL:0000211;7.86e-07;61!CL:0000723;8.11e-07;61!CL:0002334;8.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.41e-21,121;CL:0000057,7.96e-20,76;CL:0000680,2.39e-16,58;CL:0000056,2.39e-16,58;CL:0000355,2.39e-16,58;CL:0000187,6.67e-15,55;CL:0000393,2.08e-12,61;CL:0000211,2.08e-12,61;CL:0000192,3.82e-12,43;CL:0000514,3.82e-12,43;CL:0002321,2.48e-11,250;CL:0000359,4.73e-11,32;CL:0002620,4.35e-08,23;CL:0002334,8.69e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;5.47e-09;43!CL:0000355;1.30e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.08e-18!84;UBERON:0002049!1.70e-17!79;UBERON:0007798!1.70e-17!79;UBERON:0000914!1.81e-17!83;UBERON:0002329!1.81e-17!83;UBERON:0003077!1.81e-17!83;UBERON:0003059!1.81e-17!83;UBERON:0007282!1.81e-17!83;UBERON:0009618!1.81e-17!83;UBERON:0007285!1.81e-17!83;UBERON:0000468!8.41e-16!659;UBERON:0000055!3.85e-15!69;UBERON:0004290!4.02e-15!70;UBERON:0001981!6.74e-15!60;UBERON:0007500!6.74e-15!60;UBERON:0004537!6.74e-15!60;UBERON:0006965!6.74e-15!60;UBERON:0001134!1.93e-14!61;UBERON:0002036!1.93e-14!61;UBERON:0003082!1.93e-14!61;UBERON:0002385!2.10e-14!63;UBERON:0001015!2.10e-14!63;UBERON:0000383!2.10e-14!63;UBERON:0001009!2.49e-14!113;UBERON:0000486!3.77e-14!82;UBERON:0004535!1.19e-13!110;UBERON:0005256!4.78e-13!143;UBERON:0000467!8.39e-13!625;UBERON:0001637!1.37e-12!42;UBERON:0003509!1.37e-12!42;UBERON:0004572!1.37e-12!42;UBERON:0000480!1.47e-12!626;UBERON:0003914!1.19e-11!118;UBERON:0004573!1.27e-11!33;UBERON:0004571!1.27e-11!33;UBERON:0002100!1.59e-10!216;UBERON:0000490!1.79e-10!138;UBERON:0000475!7.25e-10!365;UBERON:0007100!3.53e-09!27;UBERON:0000926!9.09e-09!448;UBERON:0004120!9.09e-09!448;UBERON:0006603!9.09e-09!448;UBERON:0000948!1.59e-08!24;UBERON:0005498!1.59e-08!24;UBERON:0004140!1.59e-08!24;UBERON:0009881!1.59e-08!24;UBERON:0004141!1.59e-08!24;UBERON:0003084!1.59e-08!24;UBERON:0007005!1.59e-08!24;UBERON:0004139!1.59e-08!24;UBERON:0004291!1.59e-08!24;UBERON:0000947!2.35e-08!21;UBERON:0010191!2.35e-08!21;UBERON:0000119!2.99e-08!312;UBERON:0000483!7.92e-08!309;UBERON:0003102!2.86e-07!95;UBERON:0000477!6.16e-07!286;UBERON:0002050!6.97e-07!605;UBERON:0005423!6.97e-07!605;UBERON:0000922!7.77e-07!612;UBERON:0002199!8.11e-07!45;UBERON:0002416!8.11e-07!45;UBERON:0000923!9.32e-07!604;UBERON:0005291!9.32e-07!604;UBERON:0006598!9.32e-07!604;UBERON:0002532!9.32e-07!604 | |ontology_enrichment_uberon=UBERON:0004872!2.08e-18!84;UBERON:0002049!1.70e-17!79;UBERON:0007798!1.70e-17!79;UBERON:0000914!1.81e-17!83;UBERON:0002329!1.81e-17!83;UBERON:0003077!1.81e-17!83;UBERON:0003059!1.81e-17!83;UBERON:0007282!1.81e-17!83;UBERON:0009618!1.81e-17!83;UBERON:0007285!1.81e-17!83;UBERON:0000468!8.41e-16!659;UBERON:0000055!3.85e-15!69;UBERON:0004290!4.02e-15!70;UBERON:0001981!6.74e-15!60;UBERON:0007500!6.74e-15!60;UBERON:0004537!6.74e-15!60;UBERON:0006965!6.74e-15!60;UBERON:0001134!1.93e-14!61;UBERON:0002036!1.93e-14!61;UBERON:0003082!1.93e-14!61;UBERON:0002385!2.10e-14!63;UBERON:0001015!2.10e-14!63;UBERON:0000383!2.10e-14!63;UBERON:0001009!2.49e-14!113;UBERON:0000486!3.77e-14!82;UBERON:0004535!1.19e-13!110;UBERON:0005256!4.78e-13!143;UBERON:0000467!8.39e-13!625;UBERON:0001637!1.37e-12!42;UBERON:0003509!1.37e-12!42;UBERON:0004572!1.37e-12!42;UBERON:0000480!1.47e-12!626;UBERON:0003914!1.19e-11!118;UBERON:0004573!1.27e-11!33;UBERON:0004571!1.27e-11!33;UBERON:0002100!1.59e-10!216;UBERON:0000490!1.79e-10!138;UBERON:0000475!7.25e-10!365;UBERON:0007100!3.53e-09!27;UBERON:0000926!9.09e-09!448;UBERON:0004120!9.09e-09!448;UBERON:0006603!9.09e-09!448;UBERON:0000948!1.59e-08!24;UBERON:0005498!1.59e-08!24;UBERON:0004140!1.59e-08!24;UBERON:0009881!1.59e-08!24;UBERON:0004141!1.59e-08!24;UBERON:0003084!1.59e-08!24;UBERON:0007005!1.59e-08!24;UBERON:0004139!1.59e-08!24;UBERON:0004291!1.59e-08!24;UBERON:0000947!2.35e-08!21;UBERON:0010191!2.35e-08!21;UBERON:0000119!2.99e-08!312;UBERON:0000483!7.92e-08!309;UBERON:0003102!2.86e-07!95;UBERON:0000477!6.16e-07!286;UBERON:0002050!6.97e-07!605;UBERON:0005423!6.97e-07!605;UBERON:0000922!7.77e-07!612;UBERON:0002199!8.11e-07!45;UBERON:0002416!8.11e-07!45;UBERON:0000923!9.32e-07!604;UBERON:0005291!9.32e-07!604;UBERON:0006598!9.32e-07!604;UBERON:0002532!9.32e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.89e-11;33!UBERON:0004571;9.89e-11;33!UBERON:0001637;2.53e-09;42!UBERON:0003509;2.53e-09;42!UBERON:0004572;2.53e-09;42!UBERON:0007100;1.48e-08;25!UBERON:0000947;2.33e-08;21!UBERON:0010191;2.33e-08;21!UBERON:0007500;6.46e-08;56!UBERON:0001981;6.46e-08;56!UBERON:0004537;6.46e-08;56!UBERON:0000948;6.66e-08;22!UBERON:0002384;3.10e-07;198!UBERON:0002049;4.09e-07;75!UBERON:0007798;4.09e-07;75!UBERON:0000055;5.34e-07;65 | |||
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| ||
|short_description=p1@CLIC4 | |short_description=p1@CLIC4 | ||
}} | }} |
Latest revision as of 01:58, 17 September 2015
Short description: | p1@CLIC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLIC4_5end |
Coexpression cluster: | C3110_spindle_mesodermal_bone_Preadipocyte_basal_Sertoli_mesenchymal |
Association with transcript: | 30bp_to_ENST00000489758_5end |
EntrezGene: | CLIC4 |
HGNC: | 13518 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.41e-21 | 121 |
fibroblast | 7.96e-20 | 76 |
muscle precursor cell | 2.39e-16 | 58 |
myoblast | 2.39e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.39e-16 | 58 |
muscle cell | 6.67e-15 | 55 |
electrically responsive cell | 2.08e-12 | 61 |
electrically active cell | 2.08e-12 | 61 |
smooth muscle cell | 3.82e-12 | 43 |
smooth muscle myoblast | 3.82e-12 | 43 |
embryonic cell | 2.48e-11 | 250 |
vascular associated smooth muscle cell | 4.73e-11 | 32 |
skin fibroblast | 4.35e-08 | 23 |
preadipocyte | 8.69e-07 | 12 |