FFCP PHASE1:Hg19::chr3:184081175..184081208,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:184081175..184081208,+
|short_description=p1@POLR2H
|description=CAGE_peak_1_at_POLR2H_5end
|association_with_transcript=0bp_to_ENST00000296223,ENST0000045...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5437 | |EntrezGene=5437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9195 | |HGNC=9195 | ||
|TSSclassifier=strong | |||
|UniProt=P52434,C9JBJ6 | |UniProt=P52434,C9JBJ6 | ||
|association_with_transcript=0bp_to_ENST00000296223,ENST00000452961,NM_006232_5end | |||
|cluster_id=chr3:184081175..184081208,+ | |||
|description=CAGE_peak_1_at_POLR2H_5end | |||
|id=chr3:184081175..184081208,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.31e-35!679;CL:0000004!3.31e-35!679;CL:0000255!3.31e-35!679;CL:0000012!7.18e-35!682;CL:0000066!5.24e-27!254;CL:0000003!2.13e-22!722;CL:0000063!6.62e-14!578;CL:0002321!4.22e-13!248;CL:0000144!5.82e-13!625;CL:0000220!7.69e-13!246;CL:0002371!1.15e-09!591;CL:0000055!1.84e-09!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.30e-27,253;CL:0002321,3.47e-13,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.96e-33!235;DOID:14566!7.10e-32!239;DOID:305!8.66e-21!106;DOID:0050687!2.55e-18!143;DOID:0050686!5.66e-17!137;DOID:2531!9.62e-10!51;DOID:0060083!9.62e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:305;8.60e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.96e-33,235;DOID:14566,7.10e-32,239;DOID:305,8.66e-21,106;DOID:0050687,2.55e-18,143;DOID:0050686,5.66e-17,137;DOID:2531,9.62e-10,51;DOID:0060083,9.62e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.99e-10!238;UBERON:0009142!1.99e-10!238;UBERON:0001048!1.05e-07!168;UBERON:0002100!2.73e-07!216;UBERON:0001737!5.65e-07!9;UBERON:0008947!6.71e-07!38;UBERON:0003258!6.71e-07!38;UBERON:0000072!7.15e-07!46;UBERON:0005256!8.41e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;6.32e-08;37!UBERON:0001737;5.79e-07;9!UBERON:0001557;5.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.25e-08,199;UBERON:0000490,1.84e-07,148;UBERON:0001048,4.05e-07,160;UBERON:0001737,5.65e-07,9;UBERON:0008947,6.71e-07,38;UBERON:0003258,6.71e-07,38;UBERON:0003104,7.27e-07,160;UBERON:0009142,7.27e-07,160;UBERON:0007503,9.74e-07,78 | |||
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| ||
|short_description=p1@POLR2H | |||
}} | }} |
Latest revision as of 02:21, 17 September 2015
Short description: | p1@POLR2H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POLR2H_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296223, ENST00000452961, NM_006232_5end |
EntrezGene: | POLR2H |
HGNC: | 9195 |
UniProt: | P52434C9JBJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.30e-27 | 253 |
embryonic cell | 3.47e-13 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.25e-08 | 199 |
unilaminar epithelium | 1.84e-07 | 148 |
primordium | 4.05e-07 | 160 |
larynx | 5.65e-07 | 9 |
respiratory primordium | 6.71e-07 | 38 |
endoderm of foregut | 6.71e-07 | 38 |
mesenchyme | 7.27e-07 | 160 |
entire embryonic mesenchyme | 7.27e-07 | 160 |
epithelial vesicle | 9.74e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.96e-33 | 235 |
disease of cellular proliferation | 7.10e-32 | 239 |
carcinoma | 8.66e-21 | 106 |
cell type cancer | 2.55e-18 | 143 |
organ system cancer | 5.66e-17 | 137 |
hematologic cancer | 9.62e-10 | 51 |
immune system cancer | 9.62e-10 | 51 |