FFCP PHASE1:Hg19::chr10:131934643..131934687,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:131934643..131934687,+ to FFCP PHASE1:Hg19::chr10:131934643..131934687,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10539 | |EntrezGene=10539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15987 | |HGNC=15987 | ||
|TSSclassifier=strong | |||
|UniProt=O76003 | |UniProt=O76003 | ||
|association_with_transcript=0bp_to_ENST00000331244,ENST00000368644,ENST00000481034,uc001lkm.1,uc001lkn.1,uc001lko.2_5end | |||
|cluster_id=chr10:131934643..131934687,+ | |||
|description=CAGE_peak_1_at_GLRX3_5end | |||
|id=chr10:131934643..131934687,+ | |||
|ontology_enrichment_celltype=CL:0000012!8.48e-47!682;CL:0000548!1.61e-46!679;CL:0000004!1.61e-46!679;CL:0000255!1.61e-46!679;CL:0000144!2.70e-31!625;CL:0000003!1.90e-30!722;CL:0002321!3.34e-28!248;CL:0000220!7.13e-28!246;CL:0002371!4.22e-26!591;CL:0000066!2.70e-25!254;CL:0000063!6.29e-20!578;CL:0000222!4.88e-17!119;CL:0000055!5.03e-16!180;CL:0000680!2.60e-11!57;CL:0000056!2.60e-11!57;CL:0000355!2.60e-11!57;CL:0000393!6.35e-11!60;CL:0000211!6.35e-11!60;CL:0000187!1.59e-10!54;CL:0000183!3.93e-10!59;CL:0000192!1.43e-09!42;CL:0000514!1.43e-09!42;CL:0002076!2.52e-09!43;CL:0000223!8.22e-09!59;CL:0000359!4.47e-08!32;CL:0002139!1.27e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.15e-07;32!CL:0002139;1.32e-07;24!CL:0002076;2.00e-07;42!CL:0000192;6.30e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.30e-28,250;CL:0000066,2.28e-25,253;CL:0000222,2.31e-17,121;CL:0000680,3.89e-11,58;CL:0000056,3.89e-11,58;CL:0000355,3.89e-11,58;CL:0000393,9.18e-11,61;CL:0000211,9.18e-11,61;CL:0000187,2.36e-10,55;CL:0002076,2.00e-09,42;CL:0000192,2.25e-09,43;CL:0000514,2.25e-09,43;CL:0000223,7.27e-09,58;CL:0000359,4.47e-08,32;CL:0002139,1.27e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;6.30e-07;43 | |||
|ontology_enrichment_disease=DOID:14566!5.13e-09!239;DOID:162!5.50e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.13e-09,239;DOID:162,5.50e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.96e-13!82;UBERON:0000914!2.97e-12!83;UBERON:0002329!2.97e-12!83;UBERON:0003077!2.97e-12!83;UBERON:0003059!2.97e-12!83;UBERON:0007282!2.97e-12!83;UBERON:0009618!2.97e-12!83;UBERON:0007285!2.97e-12!83;UBERON:0003104!7.30e-12!238;UBERON:0009142!7.30e-12!238;UBERON:0005256!1.25e-11!143;UBERON:0004290!1.81e-11!70;UBERON:0000490!3.92e-11!138;UBERON:0003914!8.05e-11!118;UBERON:0002049!3.87e-10!79;UBERON:0007798!3.87e-10!79;UBERON:0000055!4.14e-10!69;UBERON:0001981!6.03e-10!60;UBERON:0007500!6.03e-10!60;UBERON:0004537!6.03e-10!60;UBERON:0006965!6.03e-10!60;UBERON:0001637!1.90e-09!42;UBERON:0003509!1.90e-09!42;UBERON:0004572!1.90e-09!42;UBERON:0001134!2.55e-09!61;UBERON:0002036!2.55e-09!61;UBERON:0003082!2.55e-09!61;UBERON:0000926!2.90e-09!448;UBERON:0004120!2.90e-09!448;UBERON:0006603!2.90e-09!448;UBERON:0004872!9.85e-09!84;UBERON:0002100!1.21e-08!216;UBERON:0002385!3.35e-08!63;UBERON:0001015!3.35e-08!63;UBERON:0000383!3.35e-08!63;UBERON:0004573!2.89e-07!33;UBERON:0004571!2.89e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;3.02e-07;56!UBERON:0001981;3.02e-07;56!UBERON:0004537;3.02e-07;56!UBERON:0003914;4.00e-07;74!UBERON:0001637;4.65e-07;42!UBERON:0003509;4.65e-07;42!UBERON:0004572;4.65e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,4.77e-13,148;UBERON:0000486,5.50e-13,83;UBERON:0007503,3.32e-12,78;UBERON:0002329,2.53e-11,71;UBERON:0003059,2.53e-11,71;UBERON:0007282,2.53e-11,71;UBERON:0004290,2.53e-11,71;UBERON:0009618,2.53e-11,71;UBERON:0003914,6.68e-11,117;UBERON:0003077,1.22e-10,72;UBERON:0007285,1.22e-10,72;UBERON:0007524,1.59e-10,73;UBERON:0000055,1.72e-10,68;UBERON:0002049,1.73e-10,78;UBERON:0007798,1.73e-10,78;UBERON:0007500,2.33e-10,59;UBERON:0001981,2.33e-10,59;UBERON:0004537,2.33e-10,59;UBERON:0006965,2.33e-10,59;UBERON:0003104,5.66e-10,160;UBERON:0009142,5.66e-10,160;UBERON:0001637,1.90e-09,42;UBERON:0003509,1.90e-09,42;UBERON:0004572,1.90e-09,42;UBERON:0001134,3.46e-09,62;UBERON:0002036,3.46e-09,62;UBERON:0003082,3.46e-09,62;UBERON:0004872,4.93e-09,83;UBERON:0002100,1.31e-08,199;UBERON:0005256,1.32e-08,122;UBERON:0002385,4.33e-08,64;UBERON:0001015,4.33e-08,64;UBERON:0000383,4.33e-08,64;UBERON:0004573,2.89e-07,33;UBERON:0004571,2.89e-07,33 | |||
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| ||
|short_description=p1@GLRX3 | |||
}} | }} |
Latest revision as of 03:05, 17 September 2015
Short description: | p1@GLRX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLRX3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331244, ENST00000368644, ENST00000481034, uc001lkm.1, uc001lkn.1, uc001lko.2_5end |
EntrezGene: | GLRX3 |
HGNC: | 15987 |
UniProt: | O76003 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.30e-28 | 250 |
epithelial cell | 2.28e-25 | 253 |
mesodermal cell | 2.31e-17 | 121 |
muscle precursor cell | 3.89e-11 | 58 |
myoblast | 3.89e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.89e-11 | 58 |
electrically responsive cell | 9.18e-11 | 61 |
electrically active cell | 9.18e-11 | 61 |
muscle cell | 2.36e-10 | 55 |
endo-epithelial cell | 2.00e-09 | 42 |
smooth muscle cell | 2.25e-09 | 43 |
smooth muscle myoblast | 2.25e-09 | 43 |
endodermal cell | 7.27e-09 | 58 |
vascular associated smooth muscle cell | 4.47e-08 | 32 |
endothelial cell of vascular tree | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.13e-09 | 239 |
cancer | 5.50e-08 | 235 |