FFCP PHASE1:Hg19::chr20:55091858..55091864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200232 | |EntrezGene=200232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |HGNC=16100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-378bp_to_ENST00000481560_5end | |association_with_transcript=-378bp_to_ENST00000481560_5end | ||
|cluster_id=chr20:55091858..55091864,+ | |||
|description=CAGE_peak_5_at_FAM209A_5end | |description=CAGE_peak_5_at_FAM209A_5end | ||
|id=chr20:55091858..55091864,+ | |id=chr20:55091858..55091864,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.73e-22!10;CL:0000541!1.73e-22!10;CL:0002567!5.08e-20!3;CL:0000147!6.57e-16!14;CL:0000710!5.80e-11!20;CL:0000325!3.50e-09!39;CL:0000075!5.77e-08!27;CL:0002566!6.59e-08!1 | |ontology_enrichment_celltype=CL:0000148!1.73e-22!10;CL:0000541!1.73e-22!10;CL:0002567!5.08e-20!3;CL:0000147!6.57e-16!14;CL:0000710!5.80e-11!20;CL:0000325!3.50e-09!39;CL:0000075!5.77e-08!27;CL:0002566!6.59e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.27e-84;3!CL:0000148;1.77e-45;10!CL:0000147;1.05e-32;14!CL:0002566;7.48e-30;1!CL:0000710;4.19e-23;20!CL:0000075;2.82e-17;27!CL:0002077;2.04e-12;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.71e-84,3;CL:0000148,1.57e-45,10;CL:0000541,1.57e-45,10;CL:0000147,9.65e-33,14;CL:0002566,7.48e-30,1;CL:0000710,3.96e-23,20;CL:0000075,2.70e-17,27;CL:0002077,7.51e-14,34;CL:0000333,4.64e-11,41;CL:0000133,6.28e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:1909!1.18e-13!2 | |ontology_enrichment_disease=DOID:1909!1.18e-13!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002079;2.73e-29;1!UBERON:0002081;2.21e-15;2!UBERON:0004151;1.04e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.37e-29,1;UBERON:0002081,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0004151,9.90e-11,3 | |||
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|short_description=p5@FAM209A | |short_description=p5@FAM209A | ||
}} | }} |
Latest revision as of 03:18, 17 September 2015
Short description: | p5@FAM209A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM209A_5end |
Coexpression cluster: | NA |
Association with transcript: | -378bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.71e-84 | 3 |
melanocyte | 1.57e-45 | 10 |
melanoblast | 1.57e-45 | 10 |
pigment cell | 9.65e-33 | 14 |
dark melanocyte | 7.48e-30 | 1 |
neurecto-epithelial cell | 3.96e-23 | 20 |
columnar/cuboidal epithelial cell | 2.70e-17 | 27 |
ecto-epithelial cell | 7.51e-14 | 34 |
migratory neural crest cell | 4.64e-11 | 41 |
neurectodermal cell | 6.28e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.37e-29 | 1 |
cardiac atrium | 2.05e-15 | 2 |
future cardiac atrium | 2.05e-15 | 2 |
cardiac chamber | 9.90e-11 | 3 |