FFCP PHASE1:Hg19::chr4:186661365..186661384,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZT7 | |UniProt=C9IZT7 | ||
|association_with_transcript=99bp_to_ENST00000452351_5end | |association_with_transcript=99bp_to_ENST00000452351_5end | ||
|cluster_id=chr4:186661365..186661384,- | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_46_at_SORBS2_5end | |description=CAGE_peak_46_at_SORBS2_5end | ||
|id=chr4:186661365..186661384,- | |id=chr4:186661365..186661384,- | ||
|ontology_enrichment_celltype=CL:0002601!1.88e-08!1 | |ontology_enrichment_celltype=CL:0002601!1.88e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p46@SORBS2 | |short_description=p46@SORBS2 | ||
}} | }} |
Latest revision as of 03:47, 17 September 2015
Short description: | p46@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_46_at_SORBS2_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | 99bp_to_ENST00000452351_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9IZT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 2.39e-66 | 3 |
brainstem | 4.27e-34 | 6 |
regional part of metencephalon | 2.62e-23 | 9 |
metencephalon | 2.62e-23 | 9 |
future metencephalon | 2.62e-23 | 9 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |