FFCP PHASE1:Hg19::chr13:32828252..32828266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10129 | |EntrezGene=10129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20367 | |HGNC=20367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_uc001uty.2_5end | |association_with_transcript=-18bp_to_uc001uty.2_5end | ||
|cluster_id=chr13:32828252..32828266,+ | |||
|description=CAGE_peak_15_at_FRY_5end | |description=CAGE_peak_15_at_FRY_5end | ||
|id=chr13:32828252..32828266,+ | |id=chr13:32828252..32828266,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.31e-11!24;CL:0005020!2.73e-07!6;CL:0002138!2.73e-07!6;CL:0005022!2.73e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.31e-11!24;CL:0005020!2.73e-07!6;CL:0002138!2.73e-07!6;CL:0005022!2.73e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;3.81e-11;65!UBERON:0000358;4.96e-07;1!UBERON:0009143;4.96e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.34e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.91e-12,2;DOID:178,6.99e-07,1;DOID:326,6.99e-07,1;DOID:3978,6.99e-07,1;DOID:3394,6.99e-07,1;DOID:5844,6.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.98e-53!115;UBERON:0004111!1.33e-14!241;UBERON:0000477!1.54e-12!286;UBERON:0001049!1.57e-11!57;UBERON:0005068!1.57e-11!57;UBERON:0006241!1.57e-11!57;UBERON:0007135!1.57e-11!57;UBERON:0000025!1.64e-10!194;UBERON:0002619!1.91e-10!22;UBERON:0001893!4.79e-10!34;UBERON:0001950!5.19e-10!20;UBERON:0001869!1.22e-09!32;UBERON:0002791!3.41e-09!33;UBERON:0003075!6.16e-09!86;UBERON:0007284!6.16e-09!86;UBERON:0000956!7.27e-09!25;UBERON:0000203!7.27e-09!25;UBERON:0002020!8.17e-09!34;UBERON:0003528!8.17e-09!34;UBERON:0002780!8.84e-09!41;UBERON:0001890!8.84e-09!41;UBERON:0006240!8.84e-09!41;UBERON:0002616!8.86e-09!59;UBERON:0003080!1.80e-08!42;UBERON:0002346!3.15e-08!90;UBERON:0005743!9.70e-08!86;UBERON:0001017!1.46e-07!82;UBERON:0000955!2.39e-07!69;UBERON:0006238!2.39e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.40e-13;25!UBERON:0003978;1.15e-08;3!UBERON:0000946;1.15e-08;3!UBERON:0004151;4.71e-08;3!UBERON:0002146;3.22e-07;1!UBERON:0005623;3.22e-07;1!UBERON:0002135;4.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.77e-22,114;UBERON:0007100,4.06e-12,27;UBERON:0003978,1.22e-08,3;UBERON:0009751,1.22e-08,3;UBERON:0000946,1.22e-08,3;UBERON:0002523,1.22e-08,3;UBERON:0005983,1.22e-08,3;UBERON:0002165,1.22e-08,3;UBERON:0002062,1.22e-08,3;UBERON:0007280,1.22e-08,3;UBERON:0004151,3.17e-08,3;UBERON:0003103,9.19e-08,68;UBERON:0002146,3.52e-07,1;UBERON:0005623,3.52e-07,1;UBERON:0002135,4.97e-07,1;UBERON:0002084,6.60e-07,1;UBERON:0002082,6.60e-07,1;UBERON:0010226,6.60e-07,1 | |||
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| ||
|short_description=p15@FRY | |short_description=p15@FRY | ||
}} | }} |
Latest revision as of 03:49, 17 September 2015
Short description: | p15@FRY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_FRY_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_uc001uty.2_5end |
EntrezGene: | FRY |
HGNC: | 20367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.77e-22 | 114 |
primary circulatory organ | 4.06e-12 | 27 |
valve | 1.22e-08 | 3 |
cardiac mesenchyme | 1.22e-08 | 3 |
cardial valve | 1.22e-08 | 3 |
tunica intima | 1.22e-08 | 3 |
heart layer | 1.22e-08 | 3 |
endocardium | 1.22e-08 | 3 |
endocardial cushion | 1.22e-08 | 3 |
presumptive endocardium | 1.22e-08 | 3 |
cardiac chamber | 3.17e-08 | 3 |
compound organ | 9.19e-08 | 68 |
pulmonary valve | 3.52e-07 | 1 |
semi-lunar valve | 3.52e-07 | 1 |
mitral valve | 4.97e-07 | 1 |
heart left ventricle | 6.60e-07 | 1 |
cardiac ventricle | 6.60e-07 | 1 |
future cardiac ventricle | 6.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.91e-12 | 2 |
vascular disease | 6.99e-07 | 1 |
ischemia | 6.99e-07 | 1 |
extrinsic cardiomyopathy | 6.99e-07 | 1 |
myocardial ischemia | 6.99e-07 | 1 |
myocardial infarction | 6.99e-07 | 1 |