FFCP PHASE1:Hg19::chr10:134145735..134145746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80313 | |EntrezGene=80313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29346 | |HGNC=29346 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUK5,Q9C0I9 | |UniProt=B3KUK5,Q9C0I9 | ||
|association_with_transcript=0bp_to_NM_001143757,uc001lli.2_5end | |association_with_transcript=0bp_to_NM_001143757,uc001lli.2_5end | ||
|cluster_id=chr10:134145735..134145746,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_8_at_LRRC27_5end | |description=CAGE_peak_8_at_LRRC27_5end | ||
|id=chr10:134145735..134145746,+ | |id=chr10:134145735..134145746,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.94e-07!94;UBERON:0001016!5.94e-07!94;UBERON:0002780!8.85e-07!41;UBERON:0001890!8.85e-07!41;UBERON:0006240!8.85e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.70e-40;1!UBERON:0001785;2.70e-40;1!UBERON:0002464;2.70e-40;1!UBERON:0004904;2.70e-40;1!UBERON:0001021;2.70e-40;1!UBERON:0000007;6.30e-21;2!UBERON:0003714;6.30e-21;2!UBERON:0005162;6.30e-21;2!UBERON:0000122;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0000007,5.70e-21,2;UBERON:0000473,6.64e-21,8;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0001781,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
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| ||
|short_description=p8@LRRC27 | |short_description=p8@LRRC27 | ||
}} | }} |
Latest revision as of 03:53, 17 September 2015
Short description: | p8@LRRC27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LRRC27_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001143757, uc001lli.2_5end |
EntrezGene: | LRRC27 |
HGNC: | 29346 |
UniProt: | B3KUK5Q9C0I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
pituitary gland | 5.70e-21 | 2 |
testis | 6.64e-21 | 8 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
layer of retina | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |