FFCP PHASE1:Hg19::chr7:150554537..150554542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26 | |EntrezGene=26 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=80 | |HGNC=80 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-478bp_to_ENST00000480582_5end | |association_with_transcript=-478bp_to_ENST00000480582_5end | ||
|cluster_id=chr7:150554537..150554542,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_24_at_ABP1_5end | |description=CAGE_peak_24_at_ABP1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.33e-60!3;CL:0000313!6.31e-21!1;CL:0000453!8.14e-17!5;CL:0000159!3.70e-11!2;CL:0000990!8.84e-10!8;CL:0000451!3.63e-08!10 | |ontology_enrichment_celltype=CL:0002541!1.33e-60!3;CL:0000313!6.31e-21!1;CL:0000453!8.14e-17!5;CL:0000159!3.70e-11!2;CL:0000990!8.84e-10!8;CL:0000451!3.63e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.79e-195;3!CL:0000349;4.52e-32;19!CL:0000723;3.80e-10;61!CL:0000134;1.69e-09;55 | |ontology_enrichment_celltype_v019=CL:0002541;2.79e-195;3!CL:0000349;4.52e-32;19!CL:0000723;3.80e-10;61!CL:0000134;1.69e-09;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.79e-195,3;CL:0000349,4.52e-32,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2152!6.31e-21!1 | |ontology_enrichment_disease=DOID:2152!6.31e-21!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.33e-60!3;UBERON:0000920!1.33e-60!3;UBERON:0003124!6.29e-46!7;UBERON:0005631!9.48e-36!14;UBERON:0000158!9.48e-36!14;UBERON:0000478!5.58e-21!24;UBERON:0004911!6.31e-21!1;UBERON:0000997!7.72e-21!1;UBERON:0005056!7.72e-21!1;UBERON:0004909!3.70e-11!2;UBERON:0004923!6.44e-09!57 | |ontology_enrichment_uberon=UBERON:0000476!1.33e-60!3;UBERON:0000920!1.33e-60!3;UBERON:0003124!6.29e-46!7;UBERON:0005631!9.48e-36!14;UBERON:0000158!9.48e-36!14;UBERON:0000478!5.58e-21!24;UBERON:0004911!6.31e-21!1;UBERON:0000997!7.72e-21!1;UBERON:0005056!7.72e-21!1;UBERON:0004909!3.70e-11!2;UBERON:0004923!6.44e-09!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.79e-195;3!UBERON:0000920;2.79e-195;3!UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000478;1.16e-25;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;2.79e-195;3!UBERON:0000920;2.79e-195;3!UBERON:0005631;1.10e-59;10!UBERON:0000158;1.10e-59;10!UBERON:0000478;1.16e-25;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.79e-195,3;UBERON:0003124,1.28e-84,7;UBERON:0005631,4.85e-43,14;UBERON:0000158,4.85e-43,14;UBERON:0000478,1.16e-25,24;UBERON:0004923,4.66e-10,66 | |||
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|short_description=p24@ABP1 | |short_description=p24@ABP1 | ||
}} | }} |
Latest revision as of 04:24, 17 September 2015
Short description: | p24@ABP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_ABP1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -478bp_to_ENST00000480582_5end |
EntrezGene: | ABP1 |
HGNC: | 80 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.79e-195 | 3 |
extraembryonic cell | 4.52e-32 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.79e-195 | 3 |
chorion | 1.28e-84 | 7 |
extraembryonic membrane | 4.85e-43 | 14 |
membranous layer | 4.85e-43 | 14 |
extraembryonic structure | 1.16e-25 | 24 |
organ component layer | 4.66e-10 | 66 |