FFCP PHASE1:Hg19::chr17:7095642..7095662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1742 | |EntrezGene=1742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2903 | |HGNC=2903 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_ENST00000489885_5end | |association_with_transcript=-88bp_to_ENST00000489885_5end | ||
|cluster_id=chr17:7095642..7095662,- | |||
|coexpression_cluster_id=C85 | |coexpression_cluster_id=C85 | ||
|description=CAGE_peak_17_at_DLG4_5end | |description=CAGE_peak_17_at_DLG4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!6.61e-09!8 | |ontology_enrichment_celltype=CL:0000047!6.61e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.74e-19;6!CL:0000404;2.74e-19;6!CL:0002319;1.32e-11;25!CL:0000123;9.86e-08;2!CL:0000242;9.86e-08;2!CL:0000047;1.16e-07;2 | |ontology_enrichment_celltype_v019=CL:0000540;2.74e-19;6!CL:0000404;2.74e-19;6!CL:0002319;1.32e-11;25!CL:0000123;9.86e-08;2!CL:0000242;9.86e-08;2!CL:0000047;1.16e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.38e-25,8;CL:0000540,3.20e-19,6;CL:0000031,3.20e-19,6;CL:0000404,3.20e-19,6;CL:0002319,1.38e-11,25;CL:0000242,9.87e-08,2;CL:0000133,4.24e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;2.74e-19;6!UBERON:0006215;9.94e-18;3 | |ontology_enrichment_development_v019=CL:0000031;2.74e-19;6!UBERON:0006215;9.94e-18;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;1.05e-07;2!DOID:4236;1.05e-07;2!DOID:3307;2.12e-07;2 | |ontology_enrichment_disease_v019=DOID:154;1.05e-07;2!DOID:4236;1.05e-07;2!DOID:3307;2.12e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,1.05e-07,2;DOID:4236,1.05e-07,2;DOID:3307,1.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.33e-37!82;UBERON:0005743!1.35e-36!86;UBERON:0000073!2.57e-34!94;UBERON:0001016!2.57e-34!94;UBERON:0000955!2.46e-30!69;UBERON:0006238!2.46e-30!69;UBERON:0002619!2.69e-30!22;UBERON:0002616!5.23e-30!59;UBERON:0001950!6.66e-30!20;UBERON:0001049!4.52e-29!57;UBERON:0005068!4.52e-29!57;UBERON:0006241!4.52e-29!57;UBERON:0007135!4.52e-29!57;UBERON:0000956!3.01e-26!25;UBERON:0000203!3.01e-26!25;UBERON:0001893!8.38e-26!34;UBERON:0002020!9.53e-26!34;UBERON:0003528!9.53e-26!34;UBERON:0001869!4.43e-25!32;UBERON:0007023!2.08e-24!115;UBERON:0002791!7.53e-24!33;UBERON:0002780!5.14e-23!41;UBERON:0001890!5.14e-23!41;UBERON:0006240!5.14e-23!41;UBERON:0003080!2.42e-22!42;UBERON:0003075!2.70e-21!86;UBERON:0007284!2.70e-21!86;UBERON:0002346!5.56e-20!90;UBERON:0003056!8.24e-17!61;UBERON:0004121!8.25e-17!169;UBERON:0000924!3.55e-16!173;UBERON:0006601!3.55e-16!173;UBERON:0000033!1.21e-15!123;UBERON:0000153!1.63e-14!129;UBERON:0007811!1.63e-14!129;UBERON:0001872!3.10e-14!5;UBERON:0002021!1.53e-13!5;UBERON:0000200!1.69e-11!6;UBERON:0004733!4.03e-10!12;UBERON:0002028!4.03e-10!12;UBERON:0007277!4.03e-10!12;UBERON:0004732!2.96e-09!13;UBERON:0002771!6.25e-09!3;UBERON:0001871!1.64e-08!7;UBERON:0000988!1.75e-08!3;UBERON:0000025!3.76e-08!194;UBERON:0002298!6.99e-08!8;UBERON:0003076!7.16e-08!15;UBERON:0003057!7.16e-08!15;UBERON:0002680!1.69e-07!9;UBERON:0001895!1.69e-07!9;UBERON:0010092!1.69e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!8.33e-37!82;UBERON:0005743!1.35e-36!86;UBERON:0000073!2.57e-34!94;UBERON:0001016!2.57e-34!94;UBERON:0000955!2.46e-30!69;UBERON:0006238!2.46e-30!69;UBERON:0002619!2.69e-30!22;UBERON:0002616!5.23e-30!59;UBERON:0001950!6.66e-30!20;UBERON:0001049!4.52e-29!57;UBERON:0005068!4.52e-29!57;UBERON:0006241!4.52e-29!57;UBERON:0007135!4.52e-29!57;UBERON:0000956!3.01e-26!25;UBERON:0000203!3.01e-26!25;UBERON:0001893!8.38e-26!34;UBERON:0002020!9.53e-26!34;UBERON:0003528!9.53e-26!34;UBERON:0001869!4.43e-25!32;UBERON:0007023!2.08e-24!115;UBERON:0002791!7.53e-24!33;UBERON:0002780!5.14e-23!41;UBERON:0001890!5.14e-23!41;UBERON:0006240!5.14e-23!41;UBERON:0003080!2.42e-22!42;UBERON:0003075!2.70e-21!86;UBERON:0007284!2.70e-21!86;UBERON:0002346!5.56e-20!90;UBERON:0003056!8.24e-17!61;UBERON:0004121!8.25e-17!169;UBERON:0000924!3.55e-16!173;UBERON:0006601!3.55e-16!173;UBERON:0000033!1.21e-15!123;UBERON:0000153!1.63e-14!129;UBERON:0007811!1.63e-14!129;UBERON:0001872!3.10e-14!5;UBERON:0002021!1.53e-13!5;UBERON:0000200!1.69e-11!6;UBERON:0004733!4.03e-10!12;UBERON:0002028!4.03e-10!12;UBERON:0007277!4.03e-10!12;UBERON:0004732!2.96e-09!13;UBERON:0002771!6.25e-09!3;UBERON:0001871!1.64e-08!7;UBERON:0000988!1.75e-08!3;UBERON:0000025!3.76e-08!194;UBERON:0002298!6.99e-08!8;UBERON:0003076!7.16e-08!15;UBERON:0003057!7.16e-08!15;UBERON:0002680!1.69e-07!9;UBERON:0001895!1.69e-07!9;UBERON:0010092!1.69e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002680;4.79e-13;9!UBERON:0001895;4.79e-13;9!UBERON:0001872;8.09e-11;5!UBERON:0004733;6.28e-10;12!UBERON:0002028;6.28e-10;12!UBERON:0002037;2.45e-09;6!UBERON:0004732;3.31e-09;13!UBERON:0000073;8.96e-08;53!UBERON:0002616;8.96e-08;53!UBERON:0001905;2.12e-07;2!UBERON:0002757;2.12e-07;2!UBERON:0010134;2.12e-07;2!UBERON:0005408;2.12e-07;2!UBERON:0001899;2.12e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002680;4.79e-13;9!UBERON:0001895;4.79e-13;9!UBERON:0001872;8.09e-11;5!UBERON:0004733;6.28e-10;12!UBERON:0002028;6.28e-10;12!UBERON:0002037;2.45e-09;6!UBERON:0004732;3.31e-09;13!UBERON:0000073;8.96e-08;53!UBERON:0002616;8.96e-08;53!UBERON:0001905;2.12e-07;2!UBERON:0002757;2.12e-07;2!UBERON:0010134;2.12e-07;2!UBERON:0005408;2.12e-07;2!UBERON:0001899;2.12e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.95e-18,89;UBERON:0001017,1.07e-16,81;UBERON:0002680,4.79e-13,9;UBERON:0001895,4.79e-13,9;UBERON:0010092,4.79e-13,9;UBERON:0001872,9.16e-11,5;UBERON:0000073,1.23e-10,53;UBERON:0002616,1.23e-10,53;UBERON:0004121,1.76e-10,171;UBERON:0000924,1.76e-10,171;UBERON:0006601,1.76e-10,171;UBERON:0001049,4.79e-10,56;UBERON:0005068,4.79e-10,56;UBERON:0006241,4.79e-10,56;UBERON:0007135,4.79e-10,56;UBERON:0004733,6.28e-10,12;UBERON:0002028,6.28e-10,12;UBERON:0007277,6.28e-10,12;UBERON:0002037,2.26e-09,6;UBERON:0006215,2.26e-09,6;UBERON:0004732,3.31e-09,13;UBERON:0000955,4.55e-08,68;UBERON:0006238,4.55e-08,68;UBERON:0003076,4.77e-08,15;UBERON:0003057,4.77e-08,15;UBERON:0011216,1.35e-07,223;UBERON:0001905,2.12e-07,2;UBERON:0002757,2.12e-07,2;UBERON:0010134,2.12e-07,2;UBERON:0005408,2.12e-07,2;UBERON:0001899,2.12e-07,2;UBERON:0010371,9.67e-07,104 | |||
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| ||
|short_description=p17@DLG4 | |short_description=p17@DLG4 | ||
}} | }} |
Latest revision as of 04:37, 17 September 2015
Short description: | p17@DLG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_DLG4_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -88bp_to_ENST00000489885_5end |
EntrezGene: | DLG4 |
HGNC: | 2903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.38e-25 | 8 |
neuron | 3.20e-19 | 6 |
neuroblast | 3.20e-19 | 6 |
electrically signaling cell | 3.20e-19 | 6 |
neural cell | 1.38e-11 | 25 |
Merkel cell | 9.87e-08 | 2 |
neurectodermal cell | 4.24e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.95e-18 | 89 |
central nervous system | 1.07e-16 | 81 |
regional part of metencephalon | 4.79e-13 | 9 |
metencephalon | 4.79e-13 | 9 |
future metencephalon | 4.79e-13 | 9 |
parietal lobe | 9.16e-11 | 5 |
regional part of nervous system | 1.23e-10 | 53 |
regional part of brain | 1.23e-10 | 53 |
ectoderm-derived structure | 1.76e-10 | 171 |
ectoderm | 1.76e-10 | 171 |
presumptive ectoderm | 1.76e-10 | 171 |
neural tube | 4.79e-10 | 56 |
neural rod | 4.79e-10 | 56 |
future spinal cord | 4.79e-10 | 56 |
neural keel | 4.79e-10 | 56 |
segmental subdivision of hindbrain | 6.28e-10 | 12 |
hindbrain | 6.28e-10 | 12 |
presumptive hindbrain | 6.28e-10 | 12 |
cerebellum | 2.26e-09 | 6 |
rhombic lip | 2.26e-09 | 6 |
segmental subdivision of nervous system | 3.31e-09 | 13 |
brain | 4.55e-08 | 68 |
future brain | 4.55e-08 | 68 |
posterior neural tube | 4.77e-08 | 15 |
chordal neural plate | 4.77e-08 | 15 |
organ system subdivision | 1.35e-07 | 223 |
pineal body | 2.12e-07 | 2 |
regional part of epithalamus | 2.12e-07 | 2 |
secretory circumventricular organ | 2.12e-07 | 2 |
circumventricular organ | 2.12e-07 | 2 |
epithalamus | 2.12e-07 | 2 |
ecto-epithelium | 9.67e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.05e-07 | 2 |
carcinosarcoma | 1.05e-07 | 2 |
teratoma | 1.87e-07 | 2 |