FFCP PHASE1:Hg19::chr2:39348418..39348431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6654 | |EntrezGene=6654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11187 | |HGNC=11187 | ||
|TSSclassifier=strong | |||
|UniProt=Q07889 | |UniProt=Q07889 | ||
|association_with_transcript=-226bp_to_ENST00000426016_5end | |association_with_transcript=-226bp_to_ENST00000426016_5end | ||
|cluster_id=chr2:39348418..39348431,- | |||
|coexpression_cluster_id=C300 | |||
|description=CAGE_peak_17_at_SOS1_5end | |description=CAGE_peak_17_at_SOS1_5end | ||
|id=chr2:39348418..39348431,- | |id=chr2:39348418..39348431,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.25e-16;1!CL:0000911;2.25e-16;1!CL:0000814;2.25e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.07e-16,1;CL:0000914,3.07e-16,1;CL:0000911,3.07e-16,1;CL:0000814,3.07e-16,1;CL:0002042,3.07e-16,1;CL:0002039,3.07e-16,1;CL:0002040,3.07e-16,1;CL:0002041,3.07e-16,1;CL:0000893,8.74e-09,2;CL:0002489,8.74e-09,2;CL:0000809,8.74e-09,2;CL:0000808,8.74e-09,2;CL:0000894,8.74e-09,2;CL:0000806,8.74e-09,2;CL:0000807,8.74e-09,2;CL:0000805,8.74e-09,2;CL:0002425,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002425;7.49e-09;2 | |||
|ontology_enrichment_disease=DOID:1240!5.25e-10!39;DOID:8692!4.49e-09!31;DOID:2531!2.94e-08!51;DOID:0060083!2.94e-08!51;DOID:3493!6.00e-07!2;DOID:1036!8.48e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:9119;1.31e-16;1!DOID:8692;1.64e-07;31!DOID:2531;2.45e-07;51!DOID:0060083;2.45e-07;51!DOID:1240;2.97e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.41e-16,1;DOID:1240,7.66e-10,39;DOID:8692,2.97e-08,31;DOID:2531,1.61e-07,51;DOID:0060083,1.61e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p17@SOS1 | |short_description=p17@SOS1 | ||
}} | }} |
Latest revision as of 04:47, 17 September 2015
Short description: | p17@SOS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SOS1_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | -226bp_to_ENST00000426016_5end |
EntrezGene: | SOS1 |
HGNC: | 11187 |
UniProt: | Q07889 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.07e-16 | 1 |
immature NK T cell | 3.07e-16 | 1 |
effector T cell | 3.07e-16 | 1 |
mature NK T cell | 3.07e-16 | 1 |
immature NK T cell stage IV | 3.07e-16 | 1 |
immature NK T cell stage I | 3.07e-16 | 1 |
immature NK T cell stage II | 3.07e-16 | 1 |
immature NK T cell stage III | 3.07e-16 | 1 |
thymocyte | 8.74e-09 | 2 |
double negative thymocyte | 8.74e-09 | 2 |
double-positive, alpha-beta thymocyte | 8.74e-09 | 2 |
DN4 thymocyte | 8.74e-09 | 2 |
DN1 thymic pro-T cell | 8.74e-09 | 2 |
DN2 thymocyte | 8.74e-09 | 2 |
DN3 thymocyte | 8.74e-09 | 2 |
immature single positive thymocyte | 8.74e-09 | 2 |
early T lineage precursor | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.41e-16 | 1 |
leukemia | 7.66e-10 | 39 |
myeloid leukemia | 2.97e-08 | 31 |
hematologic cancer | 1.61e-07 | 51 |
immune system cancer | 1.61e-07 | 51 |