FFCP PHASE1:Hg19::chr11:1946132..1946150,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7140 | |EntrezGene=7140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |HGNC=11950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492075_5end | |association_with_transcript=0bp_to_ENST00000492075_5end | ||
|cluster_id=chr11:1946132..1946150,+ | |||
|coexpression_cluster_id=C3127 | |coexpression_cluster_id=C3127 | ||
|description=CAGE_peak_8_at_TNNT3_5end | |description=CAGE_peak_8_at_TNNT3_5end | ||
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|ontology_enrichment_celltype=CL:0000349!3.08e-11!3;CL:0002541!3.08e-11!3;CL:0002577!3.08e-11!3;CL:0002536!2.02e-07!2;CL:0002537!5.58e-07!5 | |ontology_enrichment_celltype=CL:0000349!3.08e-11!3;CL:0002541!3.08e-11!3;CL:0002577!3.08e-11!3;CL:0002536!2.02e-07!2;CL:0002537!5.58e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.15e-33;19!CL:0002577;3.16e-25;3!CL:0002541;4.75e-25;3!CL:0002537;1.19e-15;5!CL:1001319;3.67e-09;1!CL:1000600;3.67e-09;1 | |ontology_enrichment_celltype_v019=CL:0000349;1.15e-33;19!CL:0002577;3.16e-25;3!CL:0002541;4.75e-25;3!CL:0002537;1.19e-15;5!CL:1001319;3.67e-09;1!CL:1000600;3.67e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.87e-34,19;CL:0002541,3.29e-25,3;CL:0002577,3.29e-25,3;CL:0002537,1.20e-15,5;CL:1001319,3.00e-09,1;CL:1000600,3.00e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.76e-09;1!UBERON:0003124;3.67e-09;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.76e-09;1!UBERON:0003124;3.67e-09;1 | ||
|ontology_enrichment_disease=DOID:1749!4.47e-10!14 | |ontology_enrichment_disease=DOID:1749!4.47e-10!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.22e-33!14;UBERON:0000158!4.22e-33!14;UBERON:0003124!1.12e-23!7;UBERON:0000478!2.35e-21!24;UBERON:0004923!5.68e-20!57;UBERON:0000974!2.32e-18!10;UBERON:0001987!3.52e-14!4;UBERON:0004340!3.52e-14!4;UBERON:0003343!2.32e-12!4;UBERON:0004785!2.32e-12!4;UBERON:0000305!4.01e-12!7;UBERON:0000476!3.08e-11!3;UBERON:0000920!3.08e-11!3;UBERON:0004871!1.48e-10!8;UBERON:0003729!6.64e-10!5;UBERON:0000344!1.21e-08!12;UBERON:0001255!1.20e-07!2;UBERON:0001556!1.20e-07!2;UBERON:0000341!1.29e-07!2 | |ontology_enrichment_uberon=UBERON:0005631!4.22e-33!14;UBERON:0000158!4.22e-33!14;UBERON:0003124!1.12e-23!7;UBERON:0000478!2.35e-21!24;UBERON:0004923!5.68e-20!57;UBERON:0000974!2.32e-18!10;UBERON:0001987!3.52e-14!4;UBERON:0004340!3.52e-14!4;UBERON:0003343!2.32e-12!4;UBERON:0004785!2.32e-12!4;UBERON:0000305!4.01e-12!7;UBERON:0000476!3.08e-11!3;UBERON:0000920!3.08e-11!3;UBERON:0004871!1.48e-10!8;UBERON:0003729!6.64e-10!5;UBERON:0000344!1.21e-08!12;UBERON:0001255!1.20e-07!2;UBERON:0001556!1.20e-07!2;UBERON:0000341!1.29e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.99e-39;24!UBERON:0001987;1.30e-32;4!UBERON:0005631;3.28e-29;10!UBERON:0000158;3.28e-29;10!UBERON:0003124;4.75e-25;3!UBERON:0000920;4.75e-25;3!UBERON:0000305;2.49e-11;7!UBERON:0004645;3.67e-09;1!UBERON:0002426;3.67e-09;1!UBERON:0003831;3.67e-09;1!UBERON:0003898;3.67e-09;1!UBERON:0004830;3.67e-09;1!UBERON:0003830;3.67e-09;1!UBERON:0005175;3.67e-09;1!UBERON:0001774;3.67e-09;1!UBERON:0001103;3.67e-09;1!UBERON:0001256;3.67e-09;1!UBERON:0001259;3.67e-09;1!UBERON:0000077;2.65e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.99e-39;24!UBERON:0001987;1.30e-32;4!UBERON:0005631;3.28e-29;10!UBERON:0000158;3.28e-29;10!UBERON:0003124;4.75e-25;3!UBERON:0000920;4.75e-25;3!UBERON:0000305;2.49e-11;7!UBERON:0004645;3.67e-09;1!UBERON:0002426;3.67e-09;1!UBERON:0003831;3.67e-09;1!UBERON:0003898;3.67e-09;1!UBERON:0004830;3.67e-09;1!UBERON:0003830;3.67e-09;1!UBERON:0005175;3.67e-09;1!UBERON:0001774;3.67e-09;1!UBERON:0001103;3.67e-09;1!UBERON:0001256;3.67e-09;1!UBERON:0001259;3.67e-09;1!UBERON:0000077;2.65e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-56,14;UBERON:0000158,1.27e-56,14;UBERON:0003124,7.57e-56,7;UBERON:0000478,3.11e-39,24;UBERON:0001987,1.96e-32,4;UBERON:0004340,1.96e-32,4;UBERON:0000920,3.29e-25,3;UBERON:0004923,1.42e-15,66;UBERON:0000305,2.49e-11,7;UBERON:0004871,5.64e-10,8;UBERON:0004645,3.00e-09,1;UBERON:0001256,3.00e-09,1;UBERON:0001259,3.00e-09,1;UBERON:0002426,3.25e-09,1;UBERON:0003831,3.25e-09,1;UBERON:0003898,3.25e-09,1;UBERON:0004830,3.25e-09,1;UBERON:0003830,3.25e-09,1;UBERON:0005175,3.25e-09,1;UBERON:0001774,3.25e-09,1;UBERON:0001103,3.25e-09,1;UBERON:0010084,3.25e-09,1;UBERON:0000077,9.02e-07,29 | |||
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| ||
|short_description=p8@TNNT3 | |short_description=p8@TNNT3 | ||
}} | }} |
Latest revision as of 04:50, 17 September 2015
Short description: | p8@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TNNT3_5end |
Coexpression cluster: | C3127_amniotic_chorionic_rectal_Placental_squamous_umbilical_pancreatic |
Association with transcript: | 0bp_to_ENST00000492075_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.87e-34 | 19 |
chorionic membrane mesenchymal stem cell | 3.29e-25 | 3 |
placental epithelial cell | 3.29e-25 | 3 |
amnion mesenchymal stem cell | 1.20e-15 | 5 |
bladder cell | 3.00e-09 | 1 |
lower urinary tract cell | 3.00e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-56 | 14 |
membranous layer | 1.27e-56 | 14 |
chorion | 7.57e-56 | 7 |
extraembryonic structure | 3.11e-39 | 24 |
placenta | 1.96e-32 | 4 |
allantois | 1.96e-32 | 4 |
egg chorion | 3.29e-25 | 3 |
organ component layer | 1.42e-15 | 66 |
amnion | 2.49e-11 | 7 |
somatic layer of lateral plate mesoderm | 5.64e-10 | 8 |
urinary bladder urothelium | 3.00e-09 | 1 |
wall of urinary bladder | 3.00e-09 | 1 |
mucosa of urinary bladder | 3.00e-09 | 1 |
chest muscle | 3.25e-09 | 1 |
respiratory system muscle | 3.25e-09 | 1 |
skeletal muscle of trunk | 3.25e-09 | 1 |
respiratory system skeletal muscle | 3.25e-09 | 1 |
thoracic segment muscle | 3.25e-09 | 1 |
chest organ | 3.25e-09 | 1 |
muscle of trunk | 3.25e-09 | 1 |
diaphragm | 3.25e-09 | 1 |
future diaphragm | 3.25e-09 | 1 |
mixed endoderm/mesoderm-derived structure | 9.02e-07 | 29 |