FFCP PHASE1:Hg19::chr5:176074431..176074447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26262 | |EntrezGene=26262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13594 | |HGNC=13594 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000298564_5end | |association_with_transcript=-20bp_to_ENST00000298564_5end | ||
|cluster_id=chr5:176074431..176074447,+ | |||
|description=CAGE_peak_3_at_TSPAN17_5end | |description=CAGE_peak_3_at_TSPAN17_5end | ||
|id=chr5:176074431..176074447,+ | |id=chr5:176074431..176074447,+ | ||
|ontology_enrichment_celltype=CL:0000220!8.45e-18!246;CL:0002321!1.16e-17!248;CL:0000222!7.24e-14!119;CL:0000066!5.19e-11!254;CL:0000183!1.58e-09!59;CL:0000192!4.27e-09!42;CL:0000514!4.27e-09!42;CL:0000055!6.44e-09!180;CL:0000548!1.55e-08!679;CL:0000004!1.55e-08!679;CL:0000255!1.55e-08!679;CL:0000680!6.68e-08!57;CL:0000056!6.68e-08!57;CL:0000355!6.68e-08!57;CL:0000012!7.95e-08!682;CL:0000359!1.23e-07!32;CL:0000187!1.34e-07!54;CL:0000393!1.45e-07!60;CL:0000211!1.45e-07!60 | |ontology_enrichment_celltype=CL:0000220!8.45e-18!246;CL:0002321!1.16e-17!248;CL:0000222!7.24e-14!119;CL:0000066!5.19e-11!254;CL:0000183!1.58e-09!59;CL:0000192!4.27e-09!42;CL:0000514!4.27e-09!42;CL:0000055!6.44e-09!180;CL:0000548!1.55e-08!679;CL:0000004!1.55e-08!679;CL:0000255!1.55e-08!679;CL:0000680!6.68e-08!57;CL:0000056!6.68e-08!57;CL:0000355!6.68e-08!57;CL:0000012!7.95e-08!682;CL:0000359!1.23e-07!32;CL:0000187!1.34e-07!54;CL:0000393!1.45e-07!60;CL:0000211!1.45e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.21e-08;32!CL:0000192;1.99e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.37e-16,250;CL:0000222,1.31e-13,121;CL:0000192,3.79e-10,43;CL:0000514,3.79e-10,43;CL:0000359,2.85e-09,32;CL:0000680,1.71e-08,58;CL:0000056,1.71e-08,58;CL:0000355,1.71e-08,58;CL:0000187,3.97e-08,55;CL:0000066,5.82e-08,253;CL:0000393,8.89e-08,61;CL:0000211,8.89e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.99e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.03e-13!312;UBERON:0000475!2.93e-13!365;UBERON:0000483!5.36e-13!309;UBERON:0002100!1.10e-11!216;UBERON:0002049!1.04e-10!79;UBERON:0007798!1.04e-10!79;UBERON:0000468!3.12e-10!659;UBERON:0001637!4.66e-10!42;UBERON:0003509!4.66e-10!42;UBERON:0004572!4.66e-10!42;UBERON:0005256!1.39e-09!143;UBERON:0000055!1.45e-09!69;UBERON:0001981!1.55e-09!60;UBERON:0007500!1.55e-09!60;UBERON:0004537!1.55e-09!60;UBERON:0006965!1.55e-09!60;UBERON:0000481!5.19e-09!347;UBERON:0000486!7.84e-09!82;UBERON:0003914!8.84e-09!118;UBERON:0000914!2.08e-08!83;UBERON:0002329!2.08e-08!83;UBERON:0003077!2.08e-08!83;UBERON:0003059!2.08e-08!83;UBERON:0007282!2.08e-08!83;UBERON:0009618!2.08e-08!83;UBERON:0007285!2.08e-08!83;UBERON:0004573!2.39e-08!33;UBERON:0004571!2.39e-08!33;UBERON:0000467!4.01e-08!625;UBERON:0000923!5.10e-08!604;UBERON:0005291!5.10e-08!604;UBERON:0006598!5.10e-08!604;UBERON:0002532!5.10e-08!604;UBERON:0004111!6.39e-08!241;UBERON:0002050!6.81e-08!605;UBERON:0005423!6.81e-08!605;UBERON:0000480!7.08e-08!626;UBERON:0000922!9.47e-08!612;UBERON:0000490!9.93e-08!138;UBERON:0004290!1.08e-07!70;UBERON:0000025!1.12e-07!194;UBERON:0004872!2.76e-07!84;UBERON:0000477!2.95e-07!286;UBERON:0003104!3.29e-07!238;UBERON:0009142!3.29e-07!238 | |ontology_enrichment_uberon=UBERON:0000119!1.03e-13!312;UBERON:0000475!2.93e-13!365;UBERON:0000483!5.36e-13!309;UBERON:0002100!1.10e-11!216;UBERON:0002049!1.04e-10!79;UBERON:0007798!1.04e-10!79;UBERON:0000468!3.12e-10!659;UBERON:0001637!4.66e-10!42;UBERON:0003509!4.66e-10!42;UBERON:0004572!4.66e-10!42;UBERON:0005256!1.39e-09!143;UBERON:0000055!1.45e-09!69;UBERON:0001981!1.55e-09!60;UBERON:0007500!1.55e-09!60;UBERON:0004537!1.55e-09!60;UBERON:0006965!1.55e-09!60;UBERON:0000481!5.19e-09!347;UBERON:0000486!7.84e-09!82;UBERON:0003914!8.84e-09!118;UBERON:0000914!2.08e-08!83;UBERON:0002329!2.08e-08!83;UBERON:0003077!2.08e-08!83;UBERON:0003059!2.08e-08!83;UBERON:0007282!2.08e-08!83;UBERON:0009618!2.08e-08!83;UBERON:0007285!2.08e-08!83;UBERON:0004573!2.39e-08!33;UBERON:0004571!2.39e-08!33;UBERON:0000467!4.01e-08!625;UBERON:0000923!5.10e-08!604;UBERON:0005291!5.10e-08!604;UBERON:0006598!5.10e-08!604;UBERON:0002532!5.10e-08!604;UBERON:0004111!6.39e-08!241;UBERON:0002050!6.81e-08!605;UBERON:0005423!6.81e-08!605;UBERON:0000480!7.08e-08!626;UBERON:0000922!9.47e-08!612;UBERON:0000490!9.93e-08!138;UBERON:0004290!1.08e-07!70;UBERON:0000025!1.12e-07!194;UBERON:0004872!2.76e-07!84;UBERON:0000477!2.95e-07!286;UBERON:0003104!3.29e-07!238;UBERON:0009142!3.29e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.63e-08;33!UBERON:0004571;1.63e-08;33!UBERON:0001637;2.28e-08;42!UBERON:0003509;2.28e-08;42!UBERON:0004572;2.28e-08;42!UBERON:0003914;8.21e-08;74 | |||
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| ||
|short_description=p3@TSPAN17 | |short_description=p3@TSPAN17 | ||
}} | }} |
Latest revision as of 05:05, 17 September 2015
Short description: | p3@TSPAN17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSPAN17_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000298564_5end |
EntrezGene: | TSPAN17 |
HGNC: | 13594 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.37e-16 | 250 |
mesodermal cell | 1.31e-13 | 121 |
smooth muscle cell | 3.79e-10 | 43 |
smooth muscle myoblast | 3.79e-10 | 43 |
vascular associated smooth muscle cell | 2.85e-09 | 32 |
muscle precursor cell | 1.71e-08 | 58 |
myoblast | 1.71e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-08 | 58 |
muscle cell | 3.97e-08 | 55 |
epithelial cell | 5.82e-08 | 253 |
electrically responsive cell | 8.89e-08 | 61 |
electrically active cell | 8.89e-08 | 61 |