FFCP PHASE1:Hg19::chr8:17780466..17780477,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5108 | |EntrezGene=5108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8727 | |HGNC=8727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518930_5end | |association_with_transcript=0bp_to_ENST00000518930_5end | ||
|cluster_id=chr8:17780466..17780477,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_PCM1_5end | |description=CAGE_peak_5_at_PCM1_5end |
Latest revision as of 05:40, 17 September 2015
Short description: | p5@PCM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PCM1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000518930_5end |
EntrezGene: | PCM1 |
HGNC: | 8727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@PCM1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.95e-15 | 81 |
nervous system | 2.41e-14 | 89 |
adult organism | 2.37e-13 | 114 |
cerebral hemisphere | 2.91e-12 | 32 |
neural tube | 3.20e-12 | 56 |
neural rod | 3.20e-12 | 56 |
future spinal cord | 3.20e-12 | 56 |
neural keel | 3.20e-12 | 56 |
regional part of forebrain | 7.57e-12 | 41 |
forebrain | 7.57e-12 | 41 |
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