FFCP PHASE1:Hg19::chr11:20044502..20044530,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:20044502..20044530,+
|short_description=p5@NAV2
|description=CAGE_peak_5_at_NAV2_5end
|association_with_transcript=-105bp_to_ENST00000311043,uc009yhx.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_ENST00000311043,uc009yhx.2_5end | |||
|cluster_id=chr11:20044502..20044530,+ | |||
|description=CAGE_peak_5_at_NAV2_5end | |||
|id=chr11:20044502..20044530,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.23e-14!254;CL:0000223!1.32e-12!59;CL:0002076!7.24e-10!43;CL:0002368!2.30e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.52e-09;5!CL:0000182;3.87e-08;12!CL:0002368;5.63e-08;13!CL:0002623;5.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.51e-13,58;CL:0002322,2.52e-09,5;CL:0000066,6.73e-09,253;CL:0002076,1.48e-08,42;CL:0000182,3.69e-08,12;CL:0002368,8.20e-08,13;CL:0002623,6.45e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.00e-09;13!UBERON:0004161;7.15e-09;11!CL:0000223;8.01e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.86e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.32e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.46e-12!82;UBERON:0005743!6.01e-12!86;UBERON:0000481!1.44e-11!347;UBERON:0000475!3.75e-11!365;UBERON:0005177!4.08e-11!107;UBERON:0000153!5.92e-11!129;UBERON:0007811!5.92e-11!129;UBERON:0000064!1.32e-10!219;UBERON:0000466!3.58e-10!126;UBERON:0000033!5.17e-10!123;UBERON:0000073!6.71e-10!94;UBERON:0001016!6.71e-10!94;UBERON:0000922!1.59e-09!612;UBERON:0001049!1.71e-09!57;UBERON:0005068!1.71e-09!57;UBERON:0006241!1.71e-09!57;UBERON:0007135!1.71e-09!57;UBERON:0003076!1.98e-09!15;UBERON:0003057!1.98e-09!15;UBERON:0000955!2.95e-09!69;UBERON:0006238!2.95e-09!69;UBERON:0004121!5.68e-09!169;UBERON:0000062!8.69e-09!511;UBERON:0000477!1.23e-08!286;UBERON:0002365!1.32e-08!31;UBERON:0002330!1.32e-08!31;UBERON:0001041!1.63e-08!98;UBERON:0003075!1.80e-08!86;UBERON:0007284!1.80e-08!86;UBERON:0000924!2.56e-08!173;UBERON:0006601!2.56e-08!173;UBERON:0000468!6.70e-08!659;UBERON:0000025!7.75e-08!194;UBERON:0002616!1.33e-07!59;UBERON:0000483!1.44e-07!309;UBERON:0002346!1.52e-07!90;UBERON:0002050!1.52e-07!605;UBERON:0005423!1.52e-07!605;UBERON:0005172!2.53e-07!55;UBERON:0005173!2.53e-07!55;UBERON:0004921!2.54e-07!129;UBERON:0004185!2.54e-07!129;UBERON:0000923!2.56e-07!604;UBERON:0005291!2.56e-07!604;UBERON:0006598!2.56e-07!604;UBERON:0002532!2.56e-07!604;UBERON:0004111!2.84e-07!241;UBERON:0000119!3.07e-07!312;UBERON:0001048!4.40e-07!168;UBERON:0004733!4.88e-07!12;UBERON:0002028!4.88e-07!12;UBERON:0007277!4.88e-07!12;UBERON:0004119!7.32e-07!169;UBERON:0000925!7.32e-07!169;UBERON:0006595!7.32e-07!169;UBERON:0000077!8.58e-07!130;UBERON:0000489!8.84e-07!32;UBERON:0001004!9.52e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.10e-11;31!UBERON:0002330;2.10e-11;31!UBERON:0002107;3.39e-09;19!UBERON:0006925;3.39e-09;19!UBERON:0001044;1.05e-08;6!UBERON:0003293;1.05e-08;6!UBERON:0003294;1.05e-08;6!UBERON:0010047;1.05e-08;6!UBERON:0003408;1.05e-08;6!UBERON:0000167;1.05e-08;6!UBERON:0000489;2.20e-08;29!UBERON:0002423;7.68e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.51e-11,31;UBERON:0002330,1.51e-11,31;UBERON:0011216,9.89e-10,223;UBERON:0005172,1.11e-09,54;UBERON:0005173,1.11e-09,54;UBERON:0008835,2.81e-09,22;UBERON:0003894,2.81e-09,22;UBERON:0007499,3.12e-09,25;UBERON:0002107,3.47e-09,19;UBERON:0006925,3.47e-09,19;UBERON:0008836,3.47e-09,19;UBERON:0000489,7.17e-09,31;UBERON:0009856,9.21e-09,26;UBERON:0009854,9.35e-09,23;UBERON:0003076,1.16e-08,15;UBERON:0003057,1.16e-08,15;UBERON:0001044,1.23e-08,6;UBERON:0003293,1.23e-08,6;UBERON:0003294,1.23e-08,6;UBERON:0010047,1.23e-08,6;UBERON:0000167,1.23e-08,6;UBERON:0005177,2.49e-08,101;UBERON:0002417,3.43e-08,60;UBERON:0000916,3.43e-08,60;UBERON:0009497,7.68e-08,25;UBERON:0000015,7.68e-08,25;UBERON:0002423,7.68e-08,25;UBERON:0006235,7.68e-08,25;UBERON:0004161,7.68e-08,25;UBERON:0001041,1.68e-07,87;UBERON:0009569,6.64e-07,112 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,1.23766352960047,1.65698687863958,0,0.602694528023977,0.730310090387373,0,4.062994916534,1.22400414746552,1.88072832886853,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,5.5670016293577,3.89307896242109,0,0.221729397462564,0.175669571386252,0.785874452986276,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0.573673241497627,0,0.560677600142307,0,0.98667019366864,0,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,1.09776335516636,3.44577397635862,3.02104251460748,1.96956004529204,2.77552935963191,5.83963774521328,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.8231480226628,1.47008711385542,7.60530208930985,0.982827216677626,4.72631925345123,0,0.614942192715568,0.171567810298526,0.658501712451753,0,0,0.462942225792648,0,0,0,0.463721619900307,0.234817388471643,0,0,0,1.58040879591855,2.57545848628462,0,0,0,1.87467667973554,0.671928512795438,0.141775097242386,0.716468181622786,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.613457458595699,5.50187573165645,1.35632511849868,0.623912584592421,0,0.157702415033935,0.585707074963566,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0.601519410909855,0.0920809889358963,0,0,0,0.902399225814824,0.231046011313244,2.35304930753057,0,0.316654886678627,0,0,2.80690690932781,0,5.68987518842091,0.501689773854853,2.80363900349542,1.66215201785745,1.56712328305525,0,0,0,0,0.325378394664303,1.75169719801128,0,0,0.574265537996172,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0,0.145016693914229,0,1.60257664164127,2.14870389969272,2.69066094311149,4.59405764980503,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,1.34060455107157,3.26672954583968,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,6.83674055215828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0,0,0,0,0.422250816255987,0.398495976502139,0,52.4020115536894,0.818149460017238,0,0,0,3.75944466818779,0,0,0,0,1.93866549219044,0.834912883456661,0,0,0,0,0.341380344856499,1.27126825146383,0.236387681767936,0,0,0.347249989866585,0,0,0,0.331737779793674,0.295547618953547,0.438770794307945,1.74301541630384,5.99522100397994,0.0769502585037971,0,0,2.78248697670294,1.19512109114209,3.19001159731919,1.09917112082235,9.59462596833542,0,0,0,0,0,0,0,0,0,9.95720129770801,4.09923907158428,0,0,0,0,0,0,0,1.48282492557489,0,0.702793337176017,0,0.782658475728359,0,0,1.20990716048664,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,1.56203764501618,0.391969589657511,1.21882889212564,1.22308667769421,0,0.483781656445426,0.730893170861856,0.328461828212837,0.193978032976839,0,0,0,0,0.443175571691151,0,0.0801588202515337,0,0,0.288180834308212,0,0.686379991447858,0,0,3.06402245001834,0.135904206073614,0,0,0.866851769704557,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,6.98975697164723,8.35101732456571,9.64265543059648,8.15582880635637,5.90564889088493,0,0,0.136203406111576,4.34033500855552,1.78801267576404,1.24632101408756,0,0,0.789744236554321,0,4.72834243795189,9.91391715751464,0,13.0879757712977,0.383830394638891,0,0,0,0,0,0,0,0,0,0,2.05173127149315,6.62534444561107,0.775697738169303,0.13223260174269,0.513260513652988,0,0,0.628817220398664,0,0,0,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0,0.3755727921195,4.0138643698305,0.665574309221114,3.29110935589332,1.52183498429854,1.62474530350739,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,1.86623178009892,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.385375350578757,0,0.798169295285756,1.23069818544453,0,0.760729777106397,1.29180516505481,0,0,0,1.46742878817343,1.5018336599544,0,0,0.198916222116275,0.376051641746286,0,1.56302802246618,0,0,0,0.810451015420736,0.781078098613847,0,0.507326481551255,0,3.83780436800028,0,0,4.47168496738583,0,0,0,0.227662191351298,2.39496399439125,0,0,1.22345519358297,0.789273282754189,0,0,0,0,0,0,0.431855182437243,0,0.0714765441766563,0,0,3.30330717374901,0,1.24329698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| ||
|short_description=p5@NAV2 | |||
}} | }} |
Latest revision as of 05:42, 17 September 2015
Short description: | p5@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -105bp_to_ENST00000311043, uc009yhx.2_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 7.51e-13 | 58 |
embryonic stem cell | 2.52e-09 | 5 |
epithelial cell | 6.73e-09 | 253 |
endo-epithelial cell | 1.48e-08 | 42 |
hepatocyte | 3.69e-08 | 12 |
respiratory epithelial cell | 8.20e-08 | 13 |
acinar cell of salivary gland | 6.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.51e-11 | 31 |
exocrine system | 1.51e-11 | 31 |
organ system subdivision | 9.89e-10 | 223 |
abdomen element | 1.11e-09 | 54 |
abdominal segment element | 1.11e-09 | 54 |
hepatic diverticulum | 2.81e-09 | 22 |
liver primordium | 2.81e-09 | 22 |
epithelial sac | 3.12e-09 | 25 |
liver | 3.47e-09 | 19 |
digestive gland | 3.47e-09 | 19 |
liver bud | 3.47e-09 | 19 |
cavitated compound organ | 7.17e-09 | 31 |
sac | 9.21e-09 | 26 |
digestive tract diverticulum | 9.35e-09 | 23 |
posterior neural tube | 1.16e-08 | 15 |
chordal neural plate | 1.16e-08 | 15 |
saliva-secreting gland | 1.23e-08 | 6 |
gland of oral region | 1.23e-08 | 6 |
gland of foregut | 1.23e-08 | 6 |
oral gland | 1.23e-08 | 6 |
oral cavity | 1.23e-08 | 6 |
trunk region element | 2.49e-08 | 101 |
abdominal segment of trunk | 3.43e-08 | 60 |
abdomen | 3.43e-08 | 60 |
epithelium of foregut-midgut junction | 7.68e-08 | 25 |
anatomical boundary | 7.68e-08 | 25 |
hepatobiliary system | 7.68e-08 | 25 |
foregut-midgut junction | 7.68e-08 | 25 |
septum transversum | 7.68e-08 | 25 |
foregut | 1.68e-07 | 87 |
subdivision of trunk | 6.64e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.32e-07 | 106 |