FFCP PHASE1:Hg19::chr11:20048789..20048822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534299_5end | |||
|cluster_id=chr11:20048789..20048822,+ | |||
|description=CAGE_peak_12_at_NAV2_5end | |||
|id=chr11:20048789..20048822,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.83e-19!254;CL:0002076!6.11e-13!43;CL:0000223!2.63e-11!59;CL:0002251!2.64e-09!21;CL:0000039!2.59e-07!7;CL:0000586!2.59e-07!7;CL:0002368!5.54e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.46e-14;3!CL:0000349;6.86e-14;19!CL:0002535;7.70e-10;2!CL:0002537;1.02e-08;5!CL:0002251;2.89e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.94e-14,3;CL:0000349,6.72e-14,19;CL:0002535,8.08e-10,2;CL:0002537,1.07e-08,5;CL:0002251,2.42e-07,20;CL:0002076,8.34e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.07e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.02e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.07e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.47e-15!14;UBERON:0000158!4.47e-15!14;UBERON:0004119!5.42e-12!169;UBERON:0000925!5.42e-12!169;UBERON:0006595!5.42e-12!169;UBERON:0003124!2.96e-11!7;UBERON:0001004!1.31e-10!72;UBERON:0000464!2.71e-09!104;UBERON:0000166!5.29e-09!21;UBERON:0000478!8.32e-09!24;UBERON:0000466!9.84e-09!126;UBERON:0000064!1.11e-08!219;UBERON:0001007!9.94e-08!155;UBERON:0001555!9.94e-08!155;UBERON:0007026!9.94e-08!155;UBERON:0000161!1.03e-07!35;UBERON:0000077!1.13e-07!130;UBERON:0005911!1.75e-07!82;UBERON:0000165!4.30e-07!28;UBERON:0000930!4.30e-07!28;UBERON:0000344!5.48e-07!12;UBERON:0001987!9.82e-07!4;UBERON:0004340!9.82e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.02e-21;10!UBERON:0000158;4.02e-21;10!UBERON:0000478;8.68e-17;24!UBERON:0003124;2.46e-14;3!UBERON:0000920;2.46e-14;3!UBERON:0001044;1.46e-11;6!UBERON:0003293;1.46e-11;6!UBERON:0003294;1.46e-11;6!UBERON:0010047;1.46e-11;6!UBERON:0003408;1.46e-11;6!UBERON:0000167;1.46e-11;6!UBERON:0000305;2.45e-10;7!UBERON:0006955;7.70e-10;2!UBERON:0004801;7.70e-10;2!UBERON:0001829;2.59e-09;2!UBERON:0000161;1.57e-07;19!UBERON:0000166;1.57e-07;19!UBERON:0000002;2.51e-07;6!UBERON:0001560;2.51e-07;6!UBERON:0000974;6.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.78e-24,14;UBERON:0000158,1.78e-24,14;UBERON:0000478,8.81e-17,24;UBERON:0003124,3.11e-16,7;UBERON:0000920,1.94e-14,3;UBERON:0001044,1.20e-11,6;UBERON:0003293,1.20e-11,6;UBERON:0003294,1.20e-11,6;UBERON:0010047,1.20e-11,6;UBERON:0000167,1.20e-11,6;UBERON:0000305,2.82e-10,7;UBERON:0004923,4.90e-10,66;UBERON:0006955,8.08e-10,2;UBERON:0004801,8.08e-10,2;UBERON:0001829,2.72e-09,2;UBERON:0004871,5.34e-09,8;UBERON:0000002,2.60e-07,6;UBERON:0001560,2.60e-07,6;UBERON:0003408,5.17e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.860413786167011,0,0,0.580969714347592,0.932949495138334,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.59884970106048,0,0.878002283269004,0,0.502644862058154,1.29623823221941,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,1.34385702559088,0.567100388969546,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,4.99306318531491,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.601519410909855,0,0,0,0,0,0,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,0,0,0.824328093181778,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,2.01090682660736,0,0.376575203107117,1.29151611801369,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,1.38871292465715,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,2.37571744666111,3.37876772309155,0,0,0,0,0,0,0,6.04638594850262,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.689486746482929,0,0,0,0,0,0,0,0,0,9.06254337810921,0.153900517007594,0,0.922255617552241,4.12885164284952,8.69178975376064,9.25103363222567,1.64875668123352,14.9249737285218,0,0,0,0,0,0,0,0,0,4.24405301213784,6.64359435739522,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,1.39294730528644,1.04836000945218,0,0,0,0,0.290967049465258,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,5.1852687615695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,1.44677833618517,0.137539436597234,0,0,0,0,0.335434687599266,0.472834243795189,1.41627387964495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0.171086837884329,0,0,0.471612915298998,0,0,0,0,1.91502377331055,0,0,0,0,1.09937867375164,0,0,0,1.14681839138014,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0,2.56800037930351,0.346576998451015,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0.546974809018219,1.09651553371436,0,0,0.511049710558381,0,0,0,0.682986574053893,3.28198769601764,0,0,0.40781839786099,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0.3414369541879,3.45629830907046,1.72090943528111,0,0,0,0,0,0,1.67783147696688,0,0,0,0,0,0.485710993059139,0.467878926924211,0.795803100645473,0,0.45178432815584,0,1.81155412280008,0,0,0.470317296361523,0,6.59894331884553,0.392616934229891,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,0.203977659483963,0.26721740526556,0.735159196278759,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,1.42838658878244,0.0645889098360061,0.248298857183432,0,0.25458863311266,0.808468755832877,0,0.342233301085281,0.134704106029175,0.430333232356058,0.332660356546013,0.488419611665847,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.860413786167011,0,0,0.580969714347592,0.932949495138334,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.59884970106048,0,0.878002283269004,0,0.502644862058154,1.29623823221941,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,1.34385702559088,0.567100388969546,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,4.99306318531491,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.601519410909855,0,0,0,0,0,0,0.784349769176855,0,0.316654886678627,0,0,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,0,0,0.824328093181778,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,2.01090682660736,0,0.376575203107117,1.29151611801369,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,1.38871292465715,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,2.37571744666111,3.37876772309155,0,0,0,0,0,0,0,6.04638594850262,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.689486746482929,0,0,0,0,0,0,0,0,0,9.06254337810921,0.153900517007594,0,0.922255617552241,4.12885164284952,8.69178975376064,9.25103363222567,1.64875668123352,14.9249737285218,0,0,0,0,0,0,0,0,0,4.24405301213784,6.64359435739522,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,1.39294730528644,1.04836000945218,0,0,0,0,0.290967049465258,0,0,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,5.1852687615695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,1.44677833618517,0.137539436597234,0,0,0,0,0.335434687599266,0.472834243795189,1.41627387964495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0.171086837884329,0,0,0.471612915298998,0,0,0,0,1.91502377331055,0,0,0,0,1.09937867375164,0,0,0,1.14681839138014,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0,2.56800037930351,0.346576998451015,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0.546974809018219,1.09651553371436,0,0,0.511049710558381,0,0,0,0.682986574053893,3.28198769601764,0,0,0.40781839786099,0,0,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0.3414369541879,3.45629830907046,1.72090943528111,0,0,0,0,0,0,1.67783147696688,0,0,0,0,0,0.485710993059139,0.467878926924211,0.795803100645473,0,0.45178432815584,0,1.81155412280008,0,0,0.470317296361523,0,6.59894331884553,0.392616934229891,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,0.203977659483963,0.26721740526556,0.735159196278759,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,1.42838658878244,0.0645889098360061,0.248298857183432,0,0.25458863311266,0.808468755832877,0,0.342233301085281,0.134704106029175,0.430333232356058,0.332660356546013,0.488419611665847,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p12@NAV2 | |||
}} | }} |
Latest revision as of 05:44, 17 September 2015
Short description: | p12@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534299_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.94e-14 | 3 |
extraembryonic cell | 6.72e-14 | 19 |
epithelial cell of cervix | 8.08e-10 | 2 |
amnion mesenchymal stem cell | 1.07e-08 | 5 |
epithelial cell of alimentary canal | 2.42e-07 | 20 |
endo-epithelial cell | 8.34e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.78e-24 | 14 |
membranous layer | 1.78e-24 | 14 |
extraembryonic structure | 8.81e-17 | 24 |
chorion | 3.11e-16 | 7 |
egg chorion | 1.94e-14 | 3 |
saliva-secreting gland | 1.20e-11 | 6 |
gland of oral region | 1.20e-11 | 6 |
gland of foregut | 1.20e-11 | 6 |
oral gland | 1.20e-11 | 6 |
oral cavity | 1.20e-11 | 6 |
amnion | 2.82e-10 | 7 |
organ component layer | 4.90e-10 | 66 |
uterine epithelium | 8.08e-10 | 2 |
cervix epithelium | 8.08e-10 | 2 |
major salivary gland | 2.72e-09 | 2 |
somatic layer of lateral plate mesoderm | 5.34e-09 | 8 |
uterine cervix | 2.60e-07 | 6 |
neck of organ | 2.60e-07 | 6 |
gland of gut | 5.17e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.07e-08 | 5 |