FFCP PHASE1:Hg19::chr7:150929550..150929619,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29270 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2E5,C9JFC7,C9JZF7,G5E9W2 | |||
|association_with_transcript=0bp_to_ENST00000035307,ENST00000377851,ENST00000482173,ENST00000495645,NM_019015,uc003wjq.1,uc003wjr.1_5end | |||
|cluster_id=chr7:150929550..150929619,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_CHPF2_5end | |||
|id=chr7:150929550..150929619,+ | |||
|ontology_enrichment_celltype=CL:0000222!7.20e-22!119;CL:0000055!1.49e-19!180;CL:0000183!5.74e-18!59;CL:0002371!2.75e-17!591;CL:0000680!1.14e-16!57;CL:0000056!1.14e-16!57;CL:0000355!1.14e-16!57;CL:0000192!1.80e-16!42;CL:0000514!1.80e-16!42;CL:0000144!4.91e-16!625;CL:0000187!9.52e-16!54;CL:0000359!8.33e-13!32;CL:0000057!1.00e-12!75;CL:0000393!3.11e-11!60;CL:0000211!3.11e-11!60;CL:0000220!5.85e-09!246;CL:0000548!1.86e-08!679;CL:0000004!1.86e-08!679;CL:0000255!1.86e-08!679;CL:0002321!2.41e-08!248;CL:0000012!3.42e-08!682;CL:0000048!3.87e-08!430;CL:0000723!1.35e-07!436;CL:0002078!3.92e-07!44;CL:0000115!7.30e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.35e-12;43!CL:0000359;4.16e-12;32!CL:0000187;8.34e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.41e-22,121;CL:0000680,7.70e-17,58;CL:0000056,7.70e-17,58;CL:0000355,7.70e-17,58;CL:0000192,1.30e-16,43;CL:0000514,1.30e-16,43;CL:0000187,6.48e-16,55;CL:0000057,3.20e-13,76;CL:0000359,8.33e-13,32;CL:0000393,2.07e-11,61;CL:0000211,2.07e-11,61;CL:0002321,1.19e-08,250;CL:0000048,1.24e-08,427;CL:0000723,4.55e-08,433;CL:0002078,2.31e-07,45;CL:0000115,4.25e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;3.35e-12;43!CL:0000355;3.52e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.87e-20!79;UBERON:0007798!5.87e-20!79;UBERON:0004535!2.60e-19!110;UBERON:0000055!9.32e-19!69;UBERON:0001009!1.30e-18!113;UBERON:0004872!1.19e-17!84;UBERON:0001981!1.19e-16!60;UBERON:0007500!1.19e-16!60;UBERON:0004537!1.19e-16!60;UBERON:0006965!1.19e-16!60;UBERON:0003914!2.77e-16!118;UBERON:0001637!1.15e-15!42;UBERON:0003509!1.15e-15!42;UBERON:0004572!1.15e-15!42;UBERON:0000914!6.57e-15!83;UBERON:0002329!6.57e-15!83;UBERON:0003077!6.57e-15!83;UBERON:0003059!6.57e-15!83;UBERON:0007282!6.57e-15!83;UBERON:0009618!6.57e-15!83;UBERON:0007285!6.57e-15!83;UBERON:0000486!1.21e-14!82;UBERON:0004290!2.03e-14!70;UBERON:0005256!9.17e-14!143;UBERON:0001134!1.02e-13!61;UBERON:0002036!1.02e-13!61;UBERON:0003082!1.02e-13!61;UBERON:0004573!2.46e-13!33;UBERON:0004571!2.46e-13!33;UBERON:0002385!7.33e-13!63;UBERON:0001015!7.33e-13!63;UBERON:0000383!7.33e-13!63;UBERON:0002100!1.42e-11!216;UBERON:0000490!1.02e-10!138;UBERON:0003081!1.17e-10!216;UBERON:0000475!6.98e-10!365;UBERON:0000926!2.75e-09!448;UBERON:0004120!2.75e-09!448;UBERON:0006603!2.75e-09!448;UBERON:0000947!6.27e-08!21;UBERON:0010191!6.27e-08!21;UBERON:0000480!7.37e-08!626;UBERON:0000119!1.01e-07!312;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.42e-07!659;UBERON:0000467!1.49e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.84e-12;33!UBERON:0004571;3.84e-12;33!UBERON:0001637;1.36e-11;42!UBERON:0003509;1.36e-11;42!UBERON:0004572;1.36e-11;42!UBERON:0007500;1.82e-09;56!UBERON:0001981;1.82e-09;56!UBERON:0004537;1.82e-09;56!UBERON:0000055;8.50e-09;65!UBERON:0003914;1.09e-08;74!UBERON:0002049;2.04e-08;75!UBERON:0007798;2.04e-08;75!UBERON:0000947;6.21e-08;21!UBERON:0010191;6.21e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.20e-19,78;UBERON:0007798,2.20e-19,78;UBERON:0004535,8.74e-19,109;UBERON:0000055,3.54e-18,68;UBERON:0001009,4.25e-18,112;UBERON:0007503,2.18e-17,78;UBERON:0004872,4.16e-17,83;UBERON:0003914,4.27e-16,117;UBERON:0007500,4.45e-16,59;UBERON:0001981,4.45e-16,59;UBERON:0004537,4.45e-16,59;UBERON:0006965,4.45e-16,59;UBERON:0001637,1.15e-15,42;UBERON:0003509,1.15e-15,42;UBERON:0004572,1.15e-15,42;UBERON:0007524,5.93e-15,73;UBERON:0000926,7.24e-15,315;UBERON:0004120,7.24e-15,315;UBERON:0006603,7.24e-15,315;UBERON:0000486,7.94e-15,83;UBERON:0002329,1.34e-14,71;UBERON:0003059,1.34e-14,71;UBERON:0007282,1.34e-14,71;UBERON:0004290,1.34e-14,71;UBERON:0009618,1.34e-14,71;UBERON:0003077,1.76e-14,72;UBERON:0007285,1.76e-14,72;UBERON:0001134,6.79e-14,62;UBERON:0002036,6.79e-14,62;UBERON:0003082,6.79e-14,62;UBERON:0004573,2.46e-13,33;UBERON:0004571,2.46e-13,33;UBERON:0002385,4.87e-13,64;UBERON:0001015,4.87e-13,64;UBERON:0000383,4.87e-13,64;UBERON:0005256,3.78e-12,122;UBERON:0000490,8.19e-12,148;UBERON:0003104,9.40e-12,160;UBERON:0009142,9.40e-12,160;UBERON:0002100,6.94e-11,199;UBERON:0003081,3.04e-10,203;UBERON:0000119,3.30e-08,309;UBERON:0000483,3.31e-08,306;UBERON:0000947,6.27e-08,21;UBERON:0010191,6.27e-08,21 | |||
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| |||
|short_description=p1@CHPF2 | |||
}} |
Latest revision as of 06:04, 17 September 2015
Short description: | p1@CHPF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHPF2_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000035307, ENST00000377851, ENST00000482173, ENST00000495645, NM_019015, uc003wjq.1, uc003wjr.1_5end |
EntrezGene: | CHPF2 |
HGNC: | 29270 |
UniProt: | Q9P2E5C9JFC7C9JZF7G5E9W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.41e-22 | 121 |
muscle precursor cell | 7.70e-17 | 58 |
myoblast | 7.70e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.70e-17 | 58 |
smooth muscle cell | 1.30e-16 | 43 |
smooth muscle myoblast | 1.30e-16 | 43 |
muscle cell | 6.48e-16 | 55 |
fibroblast | 3.20e-13 | 76 |
vascular associated smooth muscle cell | 8.33e-13 | 32 |
electrically responsive cell | 2.07e-11 | 61 |
electrically active cell | 2.07e-11 | 61 |
embryonic cell | 1.19e-08 | 250 |
multi fate stem cell | 1.24e-08 | 427 |
somatic stem cell | 4.55e-08 | 433 |
meso-epithelial cell | 2.31e-07 | 45 |
endothelial cell | 4.25e-07 | 36 |