FFCP PHASE1:Hg19::chr5:176784837..176784936,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:176784837..176784936,+
|short_description=p1@RGS14
|description=CAGE_peak_1_at_RGS14_5end
|association_with_transcript=0bp_to_ENST00000336477,ENST000004089...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10636 | |EntrezGene=10636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9996 | |HGNC=9996 | ||
|TSSclassifier=strong | |||
|UniProt=C9JCX7,O43566 | |UniProt=C9JCX7,O43566 | ||
|association_with_transcript=0bp_to_ENST00000336477,ENST00000408923,NM_006480,uc003mgf.2_5end | |||
|cluster_id=chr5:176784837..176784936,+ | |||
|coexpression_cluster_id=C909 | |||
|description=CAGE_peak_1_at_RGS14_5end | |||
|id=chr5:176784837..176784936,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.76e-57!172;CL:0000566!1.76e-57!172;CL:0002032!8.31e-54!165;CL:0000837!8.31e-54!165;CL:0000988!1.70e-53!182;CL:0000738!5.80e-49!140;CL:0002087!5.21e-42!119;CL:0002031!5.86e-42!124;CL:0000763!6.97e-27!112;CL:0000049!6.97e-27!112;CL:0000542!2.52e-25!53;CL:0000051!2.52e-25!53;CL:0000838!4.46e-25!52;CL:0000766!1.22e-20!76;CL:0000557!1.09e-17!71;CL:0000839!2.07e-16!70;CL:0002009!3.54e-16!65;CL:0002194!1.89e-15!63;CL:0000576!1.89e-15!63;CL:0000040!1.89e-15!63;CL:0000559!1.89e-15!63;CL:0002057!5.53e-14!42;CL:0000084!2.14e-13!25;CL:0000827!2.14e-13!25;CL:0000860!6.00e-12!45;CL:0000791!1.33e-11!18;CL:0000789!1.33e-11!18;CL:0002420!1.33e-11!18;CL:0002419!1.33e-11!18;CL:0000790!1.33e-11!18;CL:0000945!1.42e-11!24;CL:0000826!1.42e-11!24;CL:0000625!5.08e-08!11;CL:0000236!8.90e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.54e-16;53!CL:0000084;1.72e-14;25!CL:0002087;2.69e-13;104!CL:0000791;1.60e-12;18!CL:0000789;1.60e-12;18!CL:0002419;1.60e-12;18!CL:0000945;1.60e-12;24!CL:0000738;4.79e-12;136!CL:0000576;7.02e-11;48!CL:0000766;9.15e-11;69!CL:0000763;1.79e-10;100!CL:0000988;2.25e-10;177!CL:0000860;1.04e-09;33!CL:0002057;1.04e-09;33!CL:0000473;2.57e-09;39!CL:0000234;2.57e-09;39!CL:0000625;1.31e-08;11!CL:0000236;5.21e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.51e-65,168;CL:0002032,2.83e-61,161;CL:0000837,2.83e-61,161;CL:0000988,3.15e-61,177;CL:0000738,5.80e-57,136;CL:0002031,1.69e-49,120;CL:0002087,1.70e-49,115;CL:0000763,2.25e-31,108;CL:0000049,2.25e-31,108;CL:0000542,1.73e-27,53;CL:0000051,1.73e-27,53;CL:0000838,3.22e-27,52;CL:0000766,1.05e-25,72;CL:0000557,2.72e-22,67;CL:0000839,9.14e-21,66;CL:0002009,1.70e-20,61;CL:0002194,1.13e-19,59;CL:0000576,1.13e-19,59;CL:0000040,1.13e-19,59;CL:0000559,1.13e-19,59;CL:0000473,3.57e-16,48;CL:0000234,3.57e-16,48;CL:0000860,4.12e-15,42;CL:0002057,4.12e-15,42;CL:0000084,1.80e-14,25;CL:0000827,1.80e-14,25;CL:0000791,1.63e-12,18;CL:0000789,1.63e-12,18;CL:0002420,1.63e-12,18;CL:0002419,1.63e-12,18;CL:0000790,1.63e-12,18;CL:0000945,1.75e-12,24;CL:0000826,1.75e-12,24;CL:0000625,1.31e-08,11;CL:0000236,2.42e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.54e-16;53!CL:0000790;1.60e-12;18!CL:0002057;4.46e-11;42!CL:0000049;2.07e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!5.64e-13!51;DOID:0060083!5.64e-13!51;DOID:1240!6.35e-10!39;DOID:8692!8.61e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.96e-08;51!DOID:0060083;2.96e-08;51!DOID:1240;5.64e-08;39!DOID:8692;1.62e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.02e-13,51;DOID:0060083,2.02e-13,51;DOID:1240,4.13e-10,39;DOID:8692,8.31e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.17e-26!102;UBERON:0003061!9.17e-26!102;UBERON:0002193!2.48e-24!112;UBERON:0002371!3.05e-15!80;UBERON:0001474!6.12e-14!86;UBERON:0002405!3.43e-13!115;UBERON:0007023!1.80e-12!115;UBERON:0004765!6.94e-10!101;UBERON:0001434!6.94e-10!101;UBERON:0000178!2.01e-09!15;UBERON:0000179!2.01e-09!15;UBERON:0000463!2.01e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.86e-10;15!UBERON:0000179;3.86e-10;15!UBERON:0000463;3.86e-10;15!UBERON:0002390;6.03e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.92e-31,98;UBERON:0003061,6.92e-31,98;UBERON:0002193,1.55e-28,108;UBERON:0002405,2.21e-20,93;UBERON:0002371,7.04e-19,76;UBERON:0001474,1.96e-17,82;UBERON:0004765,1.83e-15,90;UBERON:0001434,8.03e-12,100;UBERON:0007023,1.53e-11,114;UBERON:0000178,3.89e-10,15;UBERON:0000179,3.89e-10,15;UBERON:0000463,3.89e-10,15 | |||
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| ||
|short_description=p1@RGS14 | |||
}} | }} |
Latest revision as of 06:07, 17 September 2015
Short description: | p1@RGS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RGS14_5end |
Coexpression cluster: | C909_Whole_CD19_CD8_Neutrophils_Eosinophils_CD4_blood |
Association with transcript: | 0bp_to_ENST00000336477, ENST00000408923, NM_006480, uc003mgf.2_5end |
EntrezGene: | RGS14 |
HGNC: | 9996 |
UniProt: | C9JCX7O43566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.92e-31 | 98 |
blood island | 6.92e-31 | 98 |
hemolymphoid system | 1.55e-28 | 108 |
immune system | 2.21e-20 | 93 |
bone marrow | 7.04e-19 | 76 |
bone element | 1.96e-17 | 82 |
skeletal element | 1.83e-15 | 90 |
skeletal system | 8.03e-12 | 100 |
adult organism | 1.53e-11 | 114 |
blood | 3.89e-10 | 15 |
haemolymphatic fluid | 3.89e-10 | 15 |
organism substance | 3.89e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.02e-13 | 51 |
immune system cancer | 2.02e-13 | 51 |
leukemia | 4.13e-10 | 39 |
myeloid leukemia | 8.31e-08 | 31 |