FFCP PHASE1:Hg19::chr5:176798160..176798166,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9996 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENST00000506944_5end | |||
|cluster_id=chr5:176798160..176798166,+ | |||
|description=CAGE_peak_12_at_RGS14_5end | |||
|id=chr5:176798160..176798166,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.12e-08!12;CL:0000417!4.12e-08!12;CL:0000668!4.12e-08!12;CL:0000414!4.12e-08!12;CL:0000412!4.12e-08!12;CL:0000182!4.12e-08!12;CL:0000223!9.27e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000313;4.66e-21;1!CL:0000159;3.18e-11;2!CL:0000182;1.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.45e-21,1;CL:0000159,2.73e-11,2;CL:0000182,1.33e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.53e-21;1!UBERON:0004161;8.11e-17;11!UBERON:0009497;2.43e-14;13!UBERON:0003104;6.43e-11;31 | |||
|ontology_enrichment_disease=DOID:305!3.82e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;4.66e-21;1!DOID:2152;4.66e-21;1!DOID:3149;4.66e-21;1!DOID:3451;3.18e-11;2!DOID:4159;3.18e-11;2!DOID:0060122;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.45e-21,1;DOID:3151,9.43e-21,1;DOID:3149,9.43e-21,1;DOID:3451,4.52e-11,2;DOID:4159,4.52e-11,2;DOID:0060122,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.22e-12!129;UBERON:0004185!1.22e-12!129;UBERON:0005177!1.31e-12!107;UBERON:0001007!8.34e-11!155;UBERON:0001555!8.34e-11!155;UBERON:0007026!8.34e-11!155;UBERON:0004119!8.50e-11!169;UBERON:0000925!8.50e-11!169;UBERON:0006595!8.50e-11!169;UBERON:0005057!9.74e-11!26;UBERON:0009569!1.19e-10!113;UBERON:0000077!1.31e-10!130;UBERON:0000466!1.65e-10!126;UBERON:0002417!3.81e-10!61;UBERON:0000916!3.81e-10!61;UBERON:0001041!9.03e-10!98;UBERON:0007499!2.04e-09!25;UBERON:0005172!4.67e-09!55;UBERON:0005173!4.67e-09!55;UBERON:0009856!5.71e-09!26;UBERON:0002107!1.59e-08!19;UBERON:0006925!1.59e-08!19;UBERON:0008836!1.59e-08!19;UBERON:0005911!3.82e-08!82;UBERON:0003104!9.57e-08!238;UBERON:0009142!9.57e-08!238;UBERON:0003929!9.66e-08!54;UBERON:0009497!1.27e-07!25;UBERON:0000015!1.27e-07!25;UBERON:0002423!1.27e-07!25;UBERON:0006235!1.27e-07!25;UBERON:0004161!1.27e-07!25;UBERON:0008835!3.73e-07!22;UBERON:0003894!3.73e-07!22;UBERON:0002100!6.91e-07!216;UBERON:0009854!8.87e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.66e-21;1!UBERON:0002107;4.35e-17;19!UBERON:0006925;4.35e-17;19!UBERON:0002423;4.35e-13;25!UBERON:0000341;3.18e-11;2!UBERON:0004909;3.18e-11;2!UBERON:0002365;1.57e-10;31!UBERON:0002330;1.57e-10;31!UBERON:0005172;3.33e-09;52!UBERON:0005173;3.33e-09;52!UBERON:0002368;1.80e-08;33!UBERON:0001043;4.52e-08;3!UBERON:0002417;4.87e-07;58!UBERON:0000916;4.87e-07;58!UBERON:0000949;8.70e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.45e-21,1;UBERON:0002107,4.64e-17,19;UBERON:0006925,4.64e-17,19;UBERON:0008836,4.64e-17,19;UBERON:0008835,8.57e-15,22;UBERON:0003894,8.57e-15,22;UBERON:0009854,3.62e-14,23;UBERON:0005172,3.88e-13,54;UBERON:0005173,3.88e-13,54;UBERON:0007499,4.56e-13,25;UBERON:0009497,4.56e-13,25;UBERON:0000015,4.56e-13,25;UBERON:0002423,4.56e-13,25;UBERON:0006235,4.56e-13,25;UBERON:0004161,4.56e-13,25;UBERON:0009856,1.40e-12,26;UBERON:0002417,8.11e-12,60;UBERON:0000916,8.11e-12,60;UBERON:0000341,2.23e-11,2;UBERON:0004909,2.73e-11,2;UBERON:0002365,1.31e-10,31;UBERON:0002330,1.31e-10,31;UBERON:0002368,1.95e-09,35;UBERON:0005177,2.11e-09,101;UBERON:0009569,1.90e-08,112;UBERON:0001043,4.52e-08,3;UBERON:0009143,4.52e-08,3;UBERON:0000949,2.09e-07,45 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.40101294060657,0,0.229628896329213,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.391969589657511,0,0,0,0,0,0,3.58859361007152,0.0882561266915003,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,0.329663433524666,0.741438982396034,0.295282444544246,0,0,0,0,0,0,0,0,0,1.0063040627978,1.57611414598396,0.472091293214983,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56597604516909,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0.45120521581504,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,0.435433495793923,0,0.673520530145875,0.286888821570705,0.332660356546013,0,0,0,0.179650404213174,0,0,0.406896178315738,0,0,0 | |||
|short_description=p12@RGS14 | |||
}} |
Latest revision as of 06:09, 17 September 2015
Short description: | p12@RGS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RGS14_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000506944_5end |
EntrezGene: | RGS14 |
HGNC: | 9996 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.45e-21 | 1 |
seromucus secreting cell | 2.73e-11 | 2 |
hepatocyte | 1.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.45e-21 | 1 |
liver | 4.64e-17 | 19 |
digestive gland | 4.64e-17 | 19 |
liver bud | 4.64e-17 | 19 |
hepatic diverticulum | 8.57e-15 | 22 |
liver primordium | 8.57e-15 | 22 |
digestive tract diverticulum | 3.62e-14 | 23 |
abdomen element | 3.88e-13 | 54 |
abdominal segment element | 3.88e-13 | 54 |
epithelial sac | 4.56e-13 | 25 |
epithelium of foregut-midgut junction | 4.56e-13 | 25 |
anatomical boundary | 4.56e-13 | 25 |
hepatobiliary system | 4.56e-13 | 25 |
foregut-midgut junction | 4.56e-13 | 25 |
septum transversum | 4.56e-13 | 25 |
sac | 1.40e-12 | 26 |
abdominal segment of trunk | 8.11e-12 | 60 |
abdomen | 8.11e-12 | 60 |
throat | 2.23e-11 | 2 |
epithelium of gonad | 2.73e-11 | 2 |
exocrine gland | 1.31e-10 | 31 |
exocrine system | 1.31e-10 | 31 |
endocrine gland | 1.95e-09 | 35 |
trunk region element | 2.11e-09 | 101 |
subdivision of trunk | 1.90e-08 | 112 |
esophagus | 4.52e-08 | 3 |
esophageal region | 4.52e-08 | 3 |
endocrine system | 2.09e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.45e-21 | 1 |
skin squamous cell carcinoma | 9.43e-21 | 1 |
keratoacanthoma | 9.43e-21 | 1 |
skin carcinoma | 4.52e-11 | 2 |
skin cancer | 4.52e-11 | 2 |
integumentary system cancer | 4.52e-11 | 2 |