FFCP PHASE1:Hg19::chr3:186760421..186760434,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_ENST00000448449_5end | |||
|cluster_id=chr3:186760421..186760434,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_27_at_ST6GAL1_5end | |||
|id=chr3:186760421..186760434,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.42e-16!12;CL:0000417!4.42e-16!12;CL:0000668!4.42e-16!12;CL:0000414!4.42e-16!12;CL:0000412!4.42e-16!12;CL:0000182!4.42e-16!12;CL:0000946!5.38e-13!1;CL:0000786!5.38e-13!1;CL:0000980!5.38e-13!1;CL:0000945!5.75e-08!24;CL:0000826!5.75e-08!24;CL:0000785!3.93e-07!2;CL:0000955!3.93e-07!2;CL:0000818!3.93e-07!2;CL:0000954!3.93e-07!2;CL:0000816!3.93e-07!2;CL:1000415!4.17e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!3.76e-13!1;DOID:0050177!3.76e-13!1;DOID:0050427!3.76e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!9.94e-17!25;UBERON:0000015!9.94e-17!25;UBERON:0002423!9.94e-17!25;UBERON:0006235!9.94e-17!25;UBERON:0004161!9.94e-17!25;UBERON:0002107!1.26e-15!19;UBERON:0006925!1.26e-15!19;UBERON:0008836!1.26e-15!19;UBERON:0008835!1.72e-13!22;UBERON:0003894!1.72e-13!22;UBERON:0009854!6.67e-13!23;UBERON:0007499!7.27e-12!25;UBERON:0005057!2.09e-11!26;UBERON:0009856!2.09e-11!26;UBERON:0002365!1.50e-09!31;UBERON:0002330!1.50e-09!31;UBERON:0002368!1.90e-08!35;UBERON:0003929!1.50e-07!54;UBERON:0005172!2.10e-07!55;UBERON:0005173!2.10e-07!55;UBERON:0003127!4.42e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;3.13e-18;31!UBERON:0002330;3.13e-18;31!UBERON:0002368;1.11e-14;33!UBERON:0000949;2.50e-12;43!UBERON:0005172;4.24e-09;52!UBERON:0005173;4.24e-09;52!UBERON:0002530;7.29e-07;57!UBERON:0001007;9.84e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p27@ST6GAL1 | |||
}} | }} |
Latest revision as of 06:12, 17 September 2015
Short description: | p27@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ST6GAL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -369bp_to_ENST00000448449_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
endo-epithelium | 5.11e-07 | 82 |