FFCP PHASE1:Hg19::chr13:38156549..38156595,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:38156549..38156595,- to FFCP PHASE1:Hg19::chr13:38156549..38156595,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4V4 | |UniProt=B7Z4V4 | ||
|association_with_transcript=13bp_to_AK297914_5end | |||
|cluster_id=chr13:38156549..38156595,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_1_at_AK297914_5end | |||
|id=chr13:38156549..38156595,- | |||
|ontology_enrichment_celltype=CL:0000055!6.15e-24!180;CL:0000057!8.59e-17!75;CL:0000680!3.37e-13!57;CL:0000056!3.37e-13!57;CL:0000355!3.37e-13!57;CL:0002494!5.04e-12!16;CL:0000187!8.94e-12!54;CL:0002334!5.36e-10!12;CL:0000183!7.06e-10!59;CL:0000048!1.26e-09!430;CL:0000393!1.53e-09!60;CL:0000211!1.53e-09!60;CL:0000723!2.31e-09!436;CL:0000034!1.48e-08!444;CL:0000222!1.80e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.47e-15;12!CL:1000306;1.28e-08;4!CL:0002547;1.28e-08;4!CL:0002494;4.37e-08;16!CL:0002580;2.79e-07;3!CL:0000135;5.72e-07;3!CL:0000388;5.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.31e-15,12;CL:0000057,1.06e-14,76;CL:1000306,1.10e-08,4;CL:0002547,1.10e-08,4;CL:0002494,5.86e-08,16;CL:0002580,2.65e-07,3;CL:0000048,4.68e-07,427;CL:0000135,6.09e-07,3;CL:0000388,6.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.08e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.17e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.06e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!8.15e-14!61;UBERON:0002036!8.15e-14!61;UBERON:0003082!8.15e-14!61;UBERON:0000948!1.06e-13!24;UBERON:0005498!1.06e-13!24;UBERON:0004140!1.06e-13!24;UBERON:0009881!1.06e-13!24;UBERON:0004141!1.06e-13!24;UBERON:0003084!1.06e-13!24;UBERON:0007005!1.06e-13!24;UBERON:0004139!1.06e-13!24;UBERON:0004291!1.06e-13!24;UBERON:0002385!1.15e-13!63;UBERON:0001015!1.15e-13!63;UBERON:0000383!1.15e-13!63;UBERON:0007100!1.17e-13!27;UBERON:0004290!4.76e-11!70;UBERON:0004872!1.66e-10!84;UBERON:0000914!3.54e-10!83;UBERON:0002329!3.54e-10!83;UBERON:0003077!3.54e-10!83;UBERON:0003059!3.54e-10!83;UBERON:0007282!3.54e-10!83;UBERON:0009618!3.54e-10!83;UBERON:0007285!3.54e-10!83;UBERON:0001637!1.43e-08!42;UBERON:0003509!1.43e-08!42;UBERON:0004572!1.43e-08!42;UBERON:0000486!2.95e-08!82;UBERON:0001009!4.72e-08!113;UBERON:0004535!1.03e-07!110;UBERON:0003914!7.81e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.28e-08;4!UBERON:0000415;1.28e-08;4!UBERON:0007240;1.28e-08;4!UBERON:0005742;1.28e-08;4!UBERON:0005734;1.28e-08;4!UBERON:0004664;1.28e-08;4!UBERON:0004663;1.28e-08;4!UBERON:0007846;5.72e-07;3!UBERON:0000043;5.72e-07;3!UBERON:0007845;5.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.10e-08,4;UBERON:0007240,1.10e-08,4;UBERON:0005742,1.10e-08,4;UBERON:0005734,1.10e-08,4;UBERON:0004664,1.10e-08,4;UBERON:0004663,1.10e-08,4;UBERON:0000948,1.30e-08,24;UBERON:0005498,1.30e-08,24;UBERON:0004140,1.30e-08,24;UBERON:0009881,1.30e-08,24;UBERON:0004141,1.30e-08,24;UBERON:0003084,1.30e-08,24;UBERON:0007005,1.30e-08,24;UBERON:0004139,1.30e-08,24;UBERON:0004291,1.30e-08,24;UBERON:0007100,2.34e-07,27;UBERON:0004797,4.23e-07,7;UBERON:0007846,6.09e-07,3;UBERON:0000043,6.09e-07,3;UBERON:0007845,6.09e-07,3;UBERON:0001134,7.19e-07,62;UBERON:0002036,7.19e-07,62;UBERON:0003082,7.19e-07,62 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.40954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,4.02420515822182,1.53435074212236,1.80719576192283,0,0,3.1811437882044,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,2.43042584364528,0,0,0,0,0,0,0,0,0,15.9031024542502,2.91250176828533,4.237093786023,8.89193524321323,5.32002573297536,0.560677600142307,1.06748995729705,6.41335625884616,0.933633106199299,4.17603083416033,4.08654757783647,0.151357427644931,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0.673344455816265,0.125118519871964,0,0,3.37136575378922,0,6.80593098960126,0.717558542755448,2.98980344345994,0.635795703478686,2.40072876867522,0.721367704669072,1.8034837803194,0.558350568994769,0.168776332241266,0.194874010322397,2.52433774244115,1.47279837827679,0.161646056818812,1.77504796258307,0.705264687593482,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0,0.821860859650752,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,1.55126058909333,0,3.381211010224,1.32969058292435,2.08014873822732,0,0,0,0.57191197463259,0,0,0.977208552881205,0.710783897485092,0,9.04318131178758,6.97226766880235,34.6906279401738,0,0,0,2.63587341040741,0,0,2.46128221334885,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52680532276309,11.7763132606127,1.89242898040722,0.468565659970853,0,4.5481500811197,1.03473071292505,3.98535359121262,0.184369168541703,0,0,0,0,0,0,0,0,0,9.6762045049323,4.29693525206575,10.6650835884568,4.48487022394953,0.511707249066704,13.0291676126322,0,2.46735510084249,3.37367278094941,1.23190734020714,6.23105315020345,1.39452454151951,0,0,0,1.83703117063371,2.54927635209404,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.48335359146061,0.770243085573222,0.767518373630648,0.551346289938122,0.429680979473094,1.0151168573996,1.87498580315422,4.09547363974992,0.661139661443912,0.576570202095319,0,0.10115778085555,0,5.35180989612088,0,0,0,0,1.11194531462352,4.8662461492277,0,0.632758849437452,0,0,0.42793898803392,0.318203247925937,0.78494864019923,0.539617372749944,4.11805544604082,1.29593642580255,0.202182481573316,1.58510321173008,0.421258456238981,0,0.974853958525138,0,0.9554993798559,19.7967604735198,1.13008116620243,0,0,1.75380354101505,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0.7133421029625,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,6.84287092855976,0,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0.957003479195758,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0,2.23425921017803,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.134366944973453,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,2.80455971816669,7.21247619953397,0.189403005275089,0.754703705257725,0,1.14420034198462,0.151230923763239,0.466311601748341,0.295710299979268,0.477890301491107,0.449803112163605,0.776314784381297,2.48823724704513,10.3678268677618,6.26094074174081,1.95334891696384,20.1826762449462,2.84809513243263,0.727394636810238,3.43713782535963,0,3.18476710958893,0.400027764663154,4.8075398725591,7.74523824161614,0,0.192619830407303,0,0,12.6955318286873,0,1.71315693154527,0.71635536432595,0,2.41212454536578,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36008701306837,0,0,7.75887076119505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0.20170506870352,0.781514011233092,0,2.62035068016155,0.147856086217045,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0,2.73947616152849,0,0,0,0,6.50951982061501,0,0,0.414432328326074,1.0243108625637,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4383298820438,16.9998847570699,0,0,0,0,0,0,0.07717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| ||
|short_description=p1@AK297914 | |||
}} | }} |
Latest revision as of 06:59, 17 September 2015
Short description: | p1@AK297914 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK297914_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | 13bp_to_AK297914_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.31e-15 | 12 |
fibroblast | 1.06e-14 | 76 |
fibroblast of tunica adventitia of artery | 1.10e-08 | 4 |
fibroblast of the aortic adventitia | 1.10e-08 | 4 |
cardiocyte | 5.86e-08 | 16 |
preadipocyte of the breast | 2.65e-07 | 3 |
multi fate stem cell | 4.68e-07 | 427 |
fibrocyte | 6.09e-07 | 3 |
tendon cell | 6.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.10e-08 | 4 |
tunica adventitia of artery | 1.10e-08 | 4 |
adventitia | 1.10e-08 | 4 |
tunica adventitia of blood vessel | 1.10e-08 | 4 |
aorta tunica adventitia | 1.10e-08 | 4 |
aorta wall | 1.10e-08 | 4 |
heart | 1.30e-08 | 24 |
primitive heart tube | 1.30e-08 | 24 |
primary heart field | 1.30e-08 | 24 |
anterior lateral plate mesoderm | 1.30e-08 | 24 |
heart tube | 1.30e-08 | 24 |
heart primordium | 1.30e-08 | 24 |
cardiac mesoderm | 1.30e-08 | 24 |
cardiogenic plate | 1.30e-08 | 24 |
heart rudiment | 1.30e-08 | 24 |
primary circulatory organ | 2.34e-07 | 27 |
blood vessel layer | 4.23e-07 | 7 |
dense regular connective tissue | 6.09e-07 | 3 |
tendon | 6.09e-07 | 3 |
regular connective tissue | 6.09e-07 | 3 |
skeletal muscle tissue | 7.19e-07 | 62 |
striated muscle tissue | 7.19e-07 | 62 |
myotome | 7.19e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.06e-08 | 14 |