FFCP PHASE1:Hg19::chr1:27286862..27286885,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:27286862..27286885,-
|short_description=p2@C1orf172
|description=CAGE_peak_2_at_C1orf172_5end
|association_with_transcript=0bp_to_ENST00000374109_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126695 | |EntrezGene=126695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26624 | |HGNC=26624 | ||
|TSSclassifier=strong | |||
|UniProt=Q68D65 | |UniProt=Q68D65 | ||
|association_with_transcript=0bp_to_ENST00000374109_5end | |||
|cluster_id=chr1:27286862..27286885,- | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_2_at_C1orf172_5end | |||
|id=chr1:27286862..27286885,- | |||
|ontology_enrichment_celltype=CL:0000066!1.56e-26!254;CL:0002076!3.83e-21!43;CL:0000223!7.18e-19!59;CL:0002368!5.10e-11!13;CL:0002159!2.45e-10!13;CL:0002251!8.85e-10!21;CL:0002202!4.75e-08!9;CL:0002632!4.75e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.33e-19;42!CL:0002368;2.04e-13;13!CL:0002251;1.55e-10;20!CL:0002159;7.56e-10;14!CL:0002202;1.07e-09;9!CL:0002632;1.07e-09;9!CL:0000039;5.14e-08;7!CL:0000586;5.14e-08;7!CL:0000240;1.08e-07;6!CL:0000311;1.08e-07;6!CL:0000079;1.08e-07;6!CL:0000237;1.08e-07;6!CL:0000349;5.93e-07;19!CL:0000244;7.10e-07;4!CL:0000731;7.10e-07;4!CL:0000362;7.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-30,253;CL:0002076,5.31e-25,42;CL:0000223,5.91e-19,58;CL:0002368,2.09e-13,13;CL:0002251,1.45e-10,20;CL:0002159,7.04e-10,14;CL:0002202,9.79e-10,9;CL:0002632,9.79e-10,9;CL:0000039,5.98e-08,7;CL:0000586,5.98e-08,7;CL:0000240,1.01e-07,6;CL:0000311,1.01e-07,6;CL:0000079,1.01e-07,6;CL:0000237,1.01e-07,6;CL:0000036,1.01e-07,6;CL:0000357,1.01e-07,6;CL:0000114,1.01e-07,6;CL:0000349,6.05e-07,19;CL:0000362,6.69e-07,9;CL:0000244,7.02e-07,4;CL:0000731,7.02e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;4.02e-10;58!CL:0000357;1.08e-07;6!CL:0000114;1.08e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.07e-17!106;DOID:1749!8.23e-12!14;DOID:0050687!4.00e-11!143;DOID:299!5.83e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.58e-14;14!DOID:299;5.40e-09;25!DOID:305;2.00e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.13e-18,106;DOID:1749,3.03e-14,14;DOID:0050687,1.40e-12,143;DOID:299,4.28e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.01e-24!169;UBERON:0000925!9.01e-24!169;UBERON:0006595!9.01e-24!169;UBERON:0001007!5.17e-17!155;UBERON:0001555!5.17e-17!155;UBERON:0007026!5.17e-17!155;UBERON:0004921!4.03e-15!129;UBERON:0004185!4.03e-15!129;UBERON:0000077!2.48e-14!130;UBERON:0001004!2.17e-13!72;UBERON:0000466!2.21e-12!126;UBERON:0000464!2.54e-12!104;UBERON:0005911!3.43e-12!82;UBERON:0005153!2.80e-10!37;UBERON:0005631!3.67e-10!14;UBERON:0000158!3.67e-10!14;UBERON:0001041!5.94e-10!98;UBERON:0005178!1.16e-09!34;UBERON:0002224!1.16e-09!34;UBERON:0005181!3.47e-09!35;UBERON:0000065!4.70e-09!53;UBERON:0000161!2.89e-08!35;UBERON:0003124!3.87e-08!7;UBERON:0005156!6.27e-08!59;UBERON:0000990!6.27e-08!59;UBERON:0000166!8.76e-08!21;UBERON:0000915!1.05e-07!52;UBERON:0002048!1.28e-07!22;UBERON:0000117!1.28e-07!22;UBERON:0000171!1.28e-07!22;UBERON:0000170!1.28e-07!22;UBERON:0005597!1.28e-07!22;UBERON:0000118!1.28e-07!22;UBERON:0003133!2.53e-07!48;UBERON:0005177!3.10e-07!107;UBERON:0004175!3.20e-07!25;UBERON:0005157!3.32e-07!51;UBERON:0000062!8.50e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;2.76e-10;34!UBERON:0002224;2.76e-10;34!UBERON:0004921;3.38e-10;33!UBERON:0005911;1.14e-09;36!UBERON:0005181;2.10e-09;35!UBERON:0004807;6.37e-09;22!UBERON:0002048;1.49e-08;22!UBERON:0000117;1.49e-08;22!UBERON:0000171;1.49e-08;22!UBERON:0000170;1.49e-08;22!UBERON:0001555;5.46e-08;54!UBERON:0005631;5.67e-08;10!UBERON:0000158;5.67e-08;10!UBERON:0000365;1.34e-07;5!UBERON:0007196;1.93e-07;15!UBERON:0001558;1.93e-07;15!UBERON:0000478;4.29e-07;24!UBERON:0005409;4.49e-07;22!UBERON:0000344;5.94e-07;20!UBERON:0000915;7.41e-07;52!UBERON:0000065;8.61e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.09e-24,160;UBERON:0000925,9.09e-24,160;UBERON:0006595,9.09e-24,160;UBERON:0001007,3.28e-16,145;UBERON:0001555,3.28e-16,145;UBERON:0007026,3.28e-16,145;UBERON:0004921,4.14e-14,118;UBERON:0001004,1.92e-13,74;UBERON:0005631,1.82e-12,14;UBERON:0000158,1.82e-12,14;UBERON:0005153,2.18e-12,37;UBERON:0005178,1.52e-11,34;UBERON:0002224,1.52e-11,34;UBERON:0005181,4.92e-11,35;UBERON:0005157,1.11e-10,47;UBERON:0005911,1.34e-10,82;UBERON:0000915,6.46e-10,52;UBERON:0003124,1.05e-09,7;UBERON:0000065,1.26e-09,54;UBERON:0001041,9.73e-09,87;UBERON:0002048,1.40e-08,22;UBERON:0000117,1.40e-08,22;UBERON:0000171,1.40e-08,22;UBERON:0000170,1.40e-08,22;UBERON:0005597,1.40e-08,22;UBERON:0000118,1.40e-08,22;UBERON:0006554,2.31e-08,47;UBERON:0001008,4.66e-08,48;UBERON:0000161,7.40e-08,36;UBERON:0005156,1.05e-07,59;UBERON:0000990,1.05e-07,59;UBERON:0000365,1.32e-07,5;UBERON:0008947,1.40e-07,38;UBERON:0003258,1.40e-07,38;UBERON:0007196,1.95e-07,15;UBERON:0001558,1.95e-07,15;UBERON:0004175,2.13e-07,25;UBERON:0000166,3.21e-07,22;UBERON:0000478,4.57e-07,24;UBERON:0000344,6.07e-07,20;UBERON:0005177,9.40e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.17747692052565,34.1922572306489,8.08233076881637,8.70431028153897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6301608161418,10.843413076017,12.201882335504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,15.3004021082868,12.2358866118862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02478218224572,4.36393792945335,3.15485054927904,7.19644866164613,5.69878003782387,4.99633954338929,4.66474747569167,3.78481276313443,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,4.42758378755209,0,6.58501712451753,7.86812272803337,7.23808601363742,5.46271826435325,0,0,0,0,0,0,0,0,12.6432703673484,12.8772924314231,0,0,0,0.93733833986777,2.68771405118175,3.40260233381728,3.58234090811393,4.65014301622339,10.3513323374607,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7626337152055,8.32177197552485,7.86214762657169,0,0,0,0,0,0,0,0,0,0,0,0,5.80125358039787,5.81468763879526,5.98526428083326,0,0,0,2.25599806453706,1.15523005656622,0,0,0.316654886678627,0,0,0,0,0,0,1.27438136522519,5.81753206250107,0.895499018888713,0,0,0,0,0,1.33953315142039,0,0,10.9110452219273,9.1008434445113,0,0,0,0,0,0,0,0,0,3.30569830721956,7.11103249250893,2.55225424989168,6.37294019389965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86954887625624,11.3951386841084,9.80018863751903,1.69458841398202,8.17960208075337,11.7930032967338,23.9452282909805,7.81059560703662,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,5.88096518354476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05279459102193,0,0,0,0,4.05865624054073,6.83018765915069,5.22173193568695,0,0,0,0,4.64475897881586,0.597743964753209,0.552567831062295,5.79445320064835,0,0,0,3.32512899245109,4.65455054156584,0,0.789147245095469,0,0,0,0.0927680981618513,0,3.9064164162785,7.25917999968424,1.44999915086959,3.07242310370849,4.83081935556256,8.03718118010984,0,0,0,0,0,0,0,0.295547618953547,0,0,4.3221360726367,0.846452843541768,0,6.9169171316418,2.51321404347362,3.91130538919229,8.61303131276183,2.74792780205587,14.3919389525031,0,0,0,0,0,0,0,0,0.843992258112108,3.91758739581955,2.96841450011276,0,5.97157158647103,4.86516604768365,4.27721101453538,0,0,0,0,0,0,0,3.13063390291344,0,7.89168805698781,7.25944296291983,0,0,0.450970258243478,0,0,0,0,0,1.42304773014896,0,6.94238953340524,5.6835590500339,3.13413143689449,9.60996675331166,0,0,0,0,2.03676934625681,0,0.451961481561065,0,0,0.0633107959558787,4.10657903743086,0.961905843018405,1.70762395791482,0,8.50133461209225,0,0,0,0,5.1852687615695,0,0,0,0,0,0,0,0,0,0,0,0,2.39614800598789,0,0,0,0,8.15471646692177,0.315132729228895,0.0824158583811665,0.202210631562555,0,0,0,0.136203406111576,3.21506296930038,3.57602535152808,5.40072439437941,0.2249738915515,0.77380195455795,0,9.39217125277945,2.04894838977915,3.46200281690987,0,0,7.86852309009726,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,2.81926008926669,2.24253566392159,1.41483874589699,4.97086866416635,0.992332043623902,0,0.121792598380896,8.29843635101236,0,0,0,0,5.18278517625773,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.34167452903441,4.92731497276806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80361822045529,0,0,0,0,0,4.89578277018056,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,4.80923820655025,2.35939446695481,2.93485757634686,5.54523197521623,0,0,0,0.376051641746286,0,12.5042241797295,5.50004058410987,0,3.252833896775,0,0,0,0,0,7.12735096914337,0.496211178389294,0,5.4937843885026,0,0,2.42786241694653,2.04895972216168,4.43511850813194,0,0,0,0,0,2.00216523405724,1.80534113556182,0,2.5224494698241,2.73947616152849,0,0,0,0,0.23248285073625,0,0,0.207216164163037,0.17071847709395,2.76503864725637,8.60454717640555,0,0,5.50403165248208,5.26945797651315,0,0,6.48761504427195,6.47791541860604,3.90137359943262,0,0,0,1.94284397223656,7.72000229424949,3.97901550322736,0,3.50132854320776,0,10.7183618932338,4.93914611890846,5.24542945209498,10.817297816315,0,5.4205605833374,0,0,0,0,0,0,0,2.67830907908486,2.11736923029415,6.90075753526847,3.65168194123259,4.12856355064087,0,0,0.0679914901909147,0,4.2322147241232,0,0,0,0,0.109265571963696,0,4.58949733838918,4.27547848424897,5.05421947441647,5.26485832513988,0.606229585745915,0,0,0,2.13233981900981,2.85677317756488,0.452122368852043,0.8069712858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| ||
|short_description=p2@C1orf172 | |||
}} | }} |
Latest revision as of 07:00, 17 September 2015
Short description: | p2@C1orf172 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf172_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000374109_5end |
EntrezGene: | C1orf172 |
HGNC: | 26624 |
UniProt: | Q68D65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-30 | 253 |
endo-epithelial cell | 5.31e-25 | 42 |
endodermal cell | 5.91e-19 | 58 |
respiratory epithelial cell | 2.09e-13 | 13 |
epithelial cell of alimentary canal | 1.45e-10 | 20 |
general ecto-epithelial cell | 7.04e-10 | 14 |
epithelial cell of tracheobronchial tree | 9.79e-10 | 9 |
epithelial cell of lower respiratory tract | 9.79e-10 | 9 |
germ line cell | 5.98e-08 | 7 |
germ cell | 5.98e-08 | 7 |
stratified squamous epithelial cell | 1.01e-07 | 6 |
keratin accumulating cell | 1.01e-07 | 6 |
stratified epithelial cell | 1.01e-07 | 6 |
keratinizing barrier epithelial cell | 1.01e-07 | 6 |
epithelial fate stem cell | 1.01e-07 | 6 |
stratified epithelial stem cell | 1.01e-07 | 6 |
surface ectodermal cell | 1.01e-07 | 6 |
extraembryonic cell | 6.05e-07 | 19 |
epidermal cell | 6.69e-07 | 9 |
transitional epithelial cell | 7.02e-07 | 4 |
urothelial cell | 7.02e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.13e-18 | 106 |
squamous cell carcinoma | 3.03e-14 | 14 |
cell type cancer | 1.40e-12 | 143 |
adenocarcinoma | 4.28e-09 | 25 |