FFCP PHASE1:Hg19::chr6:25042390..25042405,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9750 | |EntrezGene=9750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13872 | |HGNC=13872 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011dju.1_5end | |association_with_transcript=0bp_to_uc011dju.1_5end | ||
|cluster_id=chr6:25042390..25042405,- | |||
|coexpression_cluster_id=C4583 | |coexpression_cluster_id=C4583 | ||
|description=CAGE_peak_6_at_FAM65B_5end | |description=CAGE_peak_6_at_FAM65B_5end | ||
|id=chr6:25042390..25042405,- | |id=chr6:25042390..25042405,- | ||
|ontology_enrichment_celltype=CL:0000037!1.38e-51!172;CL:0000566!1.38e-51!172;CL:0000988!7.87e-47!182;CL:0002032!2.65e-45!165;CL:0000837!2.65e-45!165;CL:0000738!5.00e-45!140;CL:0000542!1.04e-37!53;CL:0000051!1.04e-37!53;CL:0000838!1.39e-36!52;CL:0002031!1.14e-34!124;CL:0002087!9.71e-34!119;CL:0000084!1.89e-18!25;CL:0000827!1.89e-18!25;CL:0000791!3.25e-16!18;CL:0000789!3.25e-16!18;CL:0002420!3.25e-16!18;CL:0002419!3.25e-16!18;CL:0000790!3.25e-16!18;CL:0000945!1.15e-15!24;CL:0000826!1.15e-15!24;CL:0000763!7.76e-14!112;CL:0000049!7.76e-14!112;CL:0000134!2.61e-10!358;CL:0002320!1.36e-09!365;CL:0000625!4.74e-09!11;CL:0000236!4.76e-09!14;CL:0000219!2.53e-08!390;CL:0000624!3.68e-08!6;CL:0002057!6.76e-08!42;CL:0000766!6.94e-08!76;CL:0000557!4.98e-07!71;CL:0000860!5.72e-07!45 | |ontology_enrichment_celltype=CL:0000037!1.38e-51!172;CL:0000566!1.38e-51!172;CL:0000988!7.87e-47!182;CL:0002032!2.65e-45!165;CL:0000837!2.65e-45!165;CL:0000738!5.00e-45!140;CL:0000542!1.04e-37!53;CL:0000051!1.04e-37!53;CL:0000838!1.39e-36!52;CL:0002031!1.14e-34!124;CL:0002087!9.71e-34!119;CL:0000084!1.89e-18!25;CL:0000827!1.89e-18!25;CL:0000791!3.25e-16!18;CL:0000789!3.25e-16!18;CL:0002420!3.25e-16!18;CL:0002419!3.25e-16!18;CL:0000790!3.25e-16!18;CL:0000945!1.15e-15!24;CL:0000826!1.15e-15!24;CL:0000763!7.76e-14!112;CL:0000049!7.76e-14!112;CL:0000134!2.61e-10!358;CL:0002320!1.36e-09!365;CL:0000625!4.74e-09!11;CL:0000236!4.76e-09!14;CL:0000219!2.53e-08!390;CL:0000624!3.68e-08!6;CL:0002057!6.76e-08!42;CL:0000766!6.94e-08!76;CL:0000557!4.98e-07!71;CL:0000860!5.72e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.66e-21;53!CL:0000945;1.40e-20;24!CL:0000084;6.27e-11;25!CL:0000624;4.49e-10;6!CL:0000791;4.07e-09;18!CL:0000789;4.07e-09;18!CL:0002419;4.07e-09;18!CL:0002087;8.70e-09;104!CL:0000623;4.02e-08;3!CL:0000236;1.35e-07;13!CL:0000988;3.27e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.08e-38,168;CL:0000542,2.41e-36,53;CL:0000051,2.41e-36,53;CL:0000988,4.92e-35,177;CL:0000838,1.21e-34,52;CL:0002032,1.39e-32,161;CL:0000837,1.39e-32,161;CL:0000738,2.50e-28,136;CL:0002087,9.23e-24,115;CL:0002031,4.48e-22,120;CL:0000945,1.28e-20,24;CL:0000826,1.28e-20,24;CL:0000084,7.25e-11,25;CL:0000827,7.25e-11,25;CL:0000624,4.59e-10,6;CL:0000134,5.01e-10,354;CL:0002320,1.55e-09,361;CL:0000791,4.14e-09,18;CL:0000789,4.14e-09,18;CL:0002420,4.14e-09,18;CL:0002419,4.14e-09,18;CL:0000790,4.14e-09,18;CL:0000236,6.44e-09,14;CL:0000219,7.02e-09,386;CL:0000623,4.13e-08,3;CL:0000825,4.13e-08,3;CL:0000034,1.75e-07,441;CL:0000763,5.50e-07,108;CL:0000049,5.50e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;3.66e-21;53!CL:0000790;4.07e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!6.87e-08!51;DOID:0060083!6.87e-08!51 | |ontology_enrichment_disease=DOID:2531!6.87e-08!51;DOID:0060083!6.87e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:2531;9.38e-08;51!DOID:0060083;9.38e-08;51!DOID:1240;1.70e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.69e-11,51;DOID:0060083,2.69e-11,51;DOID:1240,2.82e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.21e-13!102;UBERON:0003061!5.21e-13!102;UBERON:0002193!1.92e-11!112;UBERON:0002384!5.66e-09!375;UBERON:0000178!9.56e-07!15;UBERON:0000179!9.56e-07!15;UBERON:0000463!9.56e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!5.21e-13!102;UBERON:0003061!5.21e-13!102;UBERON:0002193!1.92e-11!112;UBERON:0002384!5.66e-09!375;UBERON:0000178!9.56e-07!15;UBERON:0000179!9.56e-07!15;UBERON:0000463!9.56e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;6.53e-07;5!UBERON:0005057;6.53e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.19e-09,371;UBERON:0004177,2.10e-07,7;UBERON:0005057,2.10e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,3.59143007015371,2.62721886239826,2.44003422072406,0.393364276848904,4.98978217526377,0.77408061658038,0,0,0,7.43685125570896,15.3542771086415,4.9912074686924,1.10799081706375,1.80490002723128,1.08505435357926,0,0.647787332037959,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,1.85823822537062,0.28769239232215,0,0.236482229888585,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0.612167784741805,1.28371610830437,0,0,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,1.86846674698672,0.251248665256743,0.521482918420201,0,0.605399502633369,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0,0,0,0,2.18455444504853,0.889509253863555,0.853460445133014,1.60158394814405,2.29900975981793,3.96626923670917,0.954053754535364,5.12291672198504,9.39579502993502,6.49864487812889,10.5737062863221,8.40762844472304,3.16060901730092,6.09800287352883,7.8602152549833,7.40165396398233,1.5046784585161,0.651844533267181,0.473447805734733,0,3.67654507721073,11.1950244840438,9.08288967792847,15.4358202346059,7.81357050326618,6.11278933531428,0.822189523018381,0.552700035571697,0.869409257205157,0,0,0,1.13309342697566,2.68254345521345,1.71813722741315,4.30133476433155,0.637130828648193,0.651083453856419,0,0.602300476311091,0.383959833463255,2.49861453104692,0.947109008176067,0.821127996921047,5.84659555351724,11.2324882229073,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.953962497221368,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,6.62194649121976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.792435906119034,0,1.29707958075265,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,6.5020150866636,9.9188684435378,6.03212270514817,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,4.64507937814297,0,4.41079428760168,0.478278818186467,4.7899049143876,4.40462351304443,13.9704564597763,0,3.93116049358842,0,0,0,6.43308755646092,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,2.99764771198038,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,7.45966571934099,0,0,58.7114522049301,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,3.44743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,1.02193298195737,1.8837630767403,3.8228686837036,0,0,0,0,5.56278026431325,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38732940334862,0,52.3145835015836,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.349843349309,0.77380195455795,0,0,1.18208560948797,1.99327434912993,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,97.4340787047167,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.34167452903441,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,12.1393120847326,12.0660961416188,0,1.38280785066935,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.754814217833368,0.154348316215889,0,4.23285566725371,0,0,0.196308467114945,0,0,0,1.4097587696978,1.35361564744512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.917899467677836,0.534434810531121,0.0918948995348449,0,0.151557396436479,0.267964130156178,0,0,0.852935927603924,0.23806443146374,2.71273421311226,4.03485642923076,0,0.0636471582781649,0,0,0,6.86990940748793,0,0,0,0,0,0,0,0,0,0,1.61019034872821,2.8851164307291 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,3.59143007015371,2.62721886239826,2.44003422072406,0.393364276848904,4.98978217526377,0.77408061658038,0,0,0,7.43685125570896,15.3542771086415,4.9912074686924,1.10799081706375,1.80490002723128,1.08505435357926,0,0.647787332037959,0,0,0,0.242584061187816,0.464858073811369,0.411167888021826,1.85823822537062,0.28769239232215,0,0.236482229888585,0.689491361473237,1.29096936716765,0,0,0.272906150057846,0,0.612167784741805,1.28371610830437,0,0,0.199463657621632,0.426224750532694,0.290209238628584,1.13477044938228,1.86846674698672,0.251248665256743,0.521482918420201,0,0.605399502633369,2.57794345191295,0.949387162322653,0,0,0,0,0,0,0,0,0,0,2.18455444504853,0.889509253863555,0.853460445133014,1.60158394814405,2.29900975981793,3.96626923670917,0.954053754535364,5.12291672198504,9.39579502993502,6.49864487812889,10.5737062863221,8.40762844472304,3.16060901730092,6.09800287352883,7.8602152549833,7.40165396398233,1.5046784585161,0.651844533267181,0.473447805734733,0,3.67654507721073,11.1950244840438,9.08288967792847,15.4358202346059,7.81357050326618,6.11278933531428,0.822189523018381,0.552700035571697,0.869409257205157,0,0,0,1.13309342697566,2.68254345521345,1.71813722741315,4.30133476433155,0.637130828648193,0.651083453856419,0,0.602300476311091,0.383959833463255,2.49861453104692,0.947109008176067,0.821127996921047,5.84659555351724,11.2324882229073,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.953962497221368,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,6.62194649121976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.792435906119034,0,1.29707958075265,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,6.5020150866636,9.9188684435378,6.03212270514817,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.862856803274467,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,4.64507937814297,0,4.41079428760168,0.478278818186467,4.7899049143876,4.40462351304443,13.9704564597763,0,3.93116049358842,0,0,0,6.43308755646092,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,2.99764771198038,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,7.45966571934099,0,0,58.7114522049301,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,3.44743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,1.02193298195737,1.8837630767403,3.8228686837036,0,0,0,0,5.56278026431325,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38732940334862,0,52.3145835015836,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.349843349309,0.77380195455795,0,0,1.18208560948797,1.99327434912993,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,97.4340787047167,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.34167452903441,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,12.1393120847326,12.0660961416188,0,1.38280785066935,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.754814217833368,0.154348316215889,0,4.23285566725371,0,0,0.196308467114945,0,0,0,1.4097587696978,1.35361564744512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.917899467677836,0.534434810531121,0.0918948995348449,0,0.151557396436479,0.267964130156178,0,0,0.852935927603924,0.23806443146374,2.71273421311226,4.03485642923076,0,0.0636471582781649,0,0,0,6.86990940748793,0,0,0,0,0,0,0,0,0,0,1.61019034872821,2.8851164307291 | ||
|short_description=p6@FAM65B | |short_description=p6@FAM65B | ||
}} | }} |
Latest revision as of 07:24, 17 September 2015
Short description: | p6@FAM65B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM65B_5end |
Coexpression cluster: | C4583_lymphoma_hairy_b_CD4_CD8_Natural_Burkitt |
Association with transcript: | 0bp_to_uc011dju.1_5end |
EntrezGene: | FAM65B |
HGNC: | 13872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.08e-38 | 168 |
lymphocyte | 2.41e-36 | 53 |
common lymphoid progenitor | 2.41e-36 | 53 |
hematopoietic cell | 4.92e-35 | 177 |
lymphoid lineage restricted progenitor cell | 1.21e-34 | 52 |
hematopoietic oligopotent progenitor cell | 1.39e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-32 | 161 |
leukocyte | 2.50e-28 | 136 |
nongranular leukocyte | 9.23e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 4.48e-22 | 120 |
lymphocyte of B lineage | 1.28e-20 | 24 |
pro-B cell | 1.28e-20 | 24 |
T cell | 7.25e-11 | 25 |
pro-T cell | 7.25e-11 | 25 |
CD4-positive, alpha-beta T cell | 4.59e-10 | 6 |
mesenchymal cell | 5.01e-10 | 354 |
connective tissue cell | 1.55e-09 | 361 |
mature alpha-beta T cell | 4.14e-09 | 18 |
alpha-beta T cell | 4.14e-09 | 18 |
immature T cell | 4.14e-09 | 18 |
mature T cell | 4.14e-09 | 18 |
immature alpha-beta T cell | 4.14e-09 | 18 |
B cell | 6.44e-09 | 14 |
motile cell | 7.02e-09 | 386 |
natural killer cell | 4.13e-08 | 3 |
pro-NK cell | 4.13e-08 | 3 |
stem cell | 1.75e-07 | 441 |
myeloid cell | 5.50e-07 | 108 |
common myeloid progenitor | 5.50e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.19e-09 | 371 |
hemopoietic organ | 2.10e-07 | 7 |
immune organ | 2.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.69e-11 | 51 |
immune system cancer | 2.69e-11 | 51 |
leukemia | 2.82e-09 | 39 |