FFCP PHASE1:Hg19::chr11:208773..208814,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:208773..208814,+ to FFCP PHASE1:Hg19::chr11:208773..208814,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60626 | |EntrezGene=60626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29550 | |HGNC=29550 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLE5,E9PI04 | |UniProt=E9PLE5,E9PI04 | ||
|association_with_transcript=0bp_to_ENST00000526982,ENST00000528357_5end | |||
|cluster_id=chr11:208773..208814,+ | |||
|description=CAGE_peak_2_at_RIC8A_5end | |||
|id=chr11:208773..208814,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.43e-24!180;CL:0000220!1.08e-16!246;CL:0002321!3.29e-16!248;CL:0002371!2.71e-14!591;CL:0000222!3.73e-14!119;CL:0000144!5.95e-14!625;CL:0000057!1.54e-12!75;CL:0000183!2.97e-12!59;CL:0000548!1.14e-10!679;CL:0000004!1.14e-10!679;CL:0000255!1.14e-10!679;CL:0000680!4.00e-10!57;CL:0000056!4.00e-10!57;CL:0000355!4.00e-10!57;CL:0000187!5.48e-10!54;CL:0000012!6.81e-10!682;CL:0000192!1.37e-09!42;CL:0000514!1.37e-09!42;CL:0000393!3.26e-08!60;CL:0000211!3.26e-08!60;CL:0000003!2.09e-07!722;CL:0000359!4.22e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.24e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.04e-16,250;CL:0000222,4.16e-14,121;CL:0000057,1.17e-12,76;CL:0000680,1.06e-09,58;CL:0000056,1.06e-09,58;CL:0000355,1.06e-09,58;CL:0000187,1.48e-09,55;CL:0000192,4.26e-09,43;CL:0000514,4.26e-09,43;CL:0000393,7.24e-08,61;CL:0000211,7.24e-08,61;CL:0000359,4.22e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.38e-12!82;UBERON:0005256!4.03e-12!143;UBERON:0000914!1.44e-11!83;UBERON:0002329!1.44e-11!83;UBERON:0003077!1.44e-11!83;UBERON:0003059!1.44e-11!83;UBERON:0007282!1.44e-11!83;UBERON:0009618!1.44e-11!83;UBERON:0007285!1.44e-11!83;UBERON:0004290!1.66e-10!70;UBERON:0002199!1.26e-09!45;UBERON:0002416!1.26e-09!45;UBERON:0000475!1.53e-09!365;UBERON:0003102!5.88e-09!95;UBERON:0000119!1.59e-08!312;UBERON:0001134!2.84e-08!61;UBERON:0002036!2.84e-08!61;UBERON:0003082!2.84e-08!61;UBERON:0002385!3.55e-08!63;UBERON:0001015!3.55e-08!63;UBERON:0000383!3.55e-08!63;UBERON:0000483!3.81e-08!309;UBERON:0002097!4.82e-08!40;UBERON:0000490!1.19e-07!138;UBERON:0002100!5.59e-07!216;UBERON:0002049!8.24e-07!79;UBERON:0007798!8.24e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;9.50e-08;50!UBERON:0002199;7.89e-07;46!UBERON:0002416;7.89e-07;46!UBERON:0002097;8.93e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.84e-12,78;UBERON:0000486,8.18e-12,83;UBERON:0002329,3.97e-10,71;UBERON:0003059,3.97e-10,71;UBERON:0007282,3.97e-10,71;UBERON:0004290,3.97e-10,71;UBERON:0009618,3.97e-10,71;UBERON:0007524,4.57e-10,73;UBERON:0003077,5.48e-10,72;UBERON:0007285,5.48e-10,72;UBERON:0002199,6.36e-10,46;UBERON:0002416,6.36e-10,46;UBERON:0003102,8.27e-10,99;UBERON:0000490,3.09e-09,148;UBERON:0000119,4.46e-09,309;UBERON:0005256,8.18e-09,122;UBERON:0000483,1.10e-08,306;UBERON:0003104,1.60e-08,160;UBERON:0009142,1.60e-08,160;UBERON:0002097,2.48e-08,41;UBERON:0001134,6.30e-08,62;UBERON:0002036,6.30e-08,62;UBERON:0003082,6.30e-08,62;UBERON:0002385,7.68e-08,64;UBERON:0001015,7.68e-08,64;UBERON:0000383,7.68e-08,64 | |||
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| ||
|short_description=p2@RIC8A | |||
}} | }} |
Latest revision as of 07:25, 17 September 2015
Short description: | p2@RIC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526982, ENST00000528357_5end |
EntrezGene: | RIC8A |
HGNC: | 29550 |
UniProt: | E9PLE5E9PI04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.04e-16 | 250 |
mesodermal cell | 4.16e-14 | 121 |
fibroblast | 1.17e-12 | 76 |
muscle precursor cell | 1.06e-09 | 58 |
myoblast | 1.06e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-09 | 58 |
muscle cell | 1.48e-09 | 55 |
smooth muscle cell | 4.26e-09 | 43 |
smooth muscle myoblast | 4.26e-09 | 43 |
electrically responsive cell | 7.24e-08 | 61 |
electrically active cell | 7.24e-08 | 61 |
vascular associated smooth muscle cell | 4.22e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 2.84e-12 | 78 |
multilaminar epithelium | 8.18e-12 | 83 |
somite | 3.97e-10 | 71 |
presomitic mesoderm | 3.97e-10 | 71 |
presumptive segmental plate | 3.97e-10 | 71 |
dermomyotome | 3.97e-10 | 71 |
trunk paraxial mesoderm | 3.97e-10 | 71 |
dense mesenchyme tissue | 4.57e-10 | 73 |
paraxial mesoderm | 5.48e-10 | 72 |
presumptive paraxial mesoderm | 5.48e-10 | 72 |
integument | 6.36e-10 | 46 |
integumental system | 6.36e-10 | 46 |
surface structure | 8.27e-10 | 99 |
unilaminar epithelium | 3.09e-09 | 148 |
cell layer | 4.46e-09 | 309 |
trunk mesenchyme | 8.18e-09 | 122 |
epithelium | 1.10e-08 | 306 |
mesenchyme | 1.60e-08 | 160 |
entire embryonic mesenchyme | 1.60e-08 | 160 |
skin of body | 2.48e-08 | 41 |
skeletal muscle tissue | 6.30e-08 | 62 |
striated muscle tissue | 6.30e-08 | 62 |
myotome | 6.30e-08 | 62 |
muscle tissue | 7.68e-08 | 64 |
musculature | 7.68e-08 | 64 |
musculature of body | 7.68e-08 | 64 |