FFCP PHASE1:Hg19::chr3:187871499..187871512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |EntrezGene=4026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |HGNC=6679 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4E3 | |UniProt=C9J4E3 | ||
|association_with_transcript=-147bp_to_ENST00000416784_5end | |association_with_transcript=-147bp_to_ENST00000416784_5end | ||
|cluster_id=chr3:187871499..187871512,+ | |||
|description=CAGE_peak_29_at_LPP_5end | |description=CAGE_peak_29_at_LPP_5end | ||
|id=chr3:187871499..187871512,+ | |id=chr3:187871499..187871512,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:3193;2.87e-11;2!DOID:962;2.87e-11;2!DOID:171;6.53e-09;10!DOID:1192;6.13e-08;3 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002370;2.00e-40;2!UBERON:0005058;2.00e-40;2!UBERON:0009113;2.00e-40;2!UBERON:0004177;7.50e-17;5!UBERON:0005057;7.50e-17;5!UBERON:0003714;2.87e-11;2!UBERON:0001875;2.87e-11;2!UBERON:0006514;2.87e-11;2 | |ontology_enrichment_development_v019=UBERON:0004140;3.81e-21;1!UBERON:0006215;6.13e-08;3 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.87e-11;2!DOID:962;2.87e-11;2!DOID:171;6.53e-09;10!DOID:1192;6.13e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.35e-11,2;DOID:962,3.35e-11,2;DOID:171,8.28e-09,10;DOID:1192,6.78e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.12e-15!115;UBERON:0002346!6.79e-08!90;UBERON:0002616!7.02e-08!59;UBERON:0001049!1.12e-07!57;UBERON:0005068!1.12e-07!57;UBERON:0006241!1.12e-07!57;UBERON:0007135!1.12e-07!57;UBERON:0003075!1.98e-07!86;UBERON:0007284!1.98e-07!86;UBERON:0005743!2.81e-07!86;UBERON:0000153!3.72e-07!129;UBERON:0007811!3.72e-07!129;UBERON:0001017!5.66e-07!82;UBERON:0000073!6.69e-07!94;UBERON:0001016!6.69e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.00e-40;2!UBERON:0005058;2.00e-40;2!UBERON:0009113;2.00e-40;2!UBERON:0004177;7.50e-17;5!UBERON:0005057;7.50e-17;5!UBERON:0003714;2.87e-11;2!UBERON:0001875;2.87e-11;2!UBERON:0006514;2.87e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.23e-21,4;UBERON:0005058,4.23e-21,4;UBERON:0009113,4.23e-21,4;UBERON:0003295,4.23e-21,4;UBERON:0005562,4.23e-21,4;UBERON:0003351,2.04e-14,6;UBERON:0004177,1.68e-12,7;UBERON:0005057,1.68e-12,7;UBERON:0001875,2.47e-11,2;UBERON:0006514,2.47e-11,2;UBERON:0003714,3.35e-11,2;UBERON:0000974,4.94e-09,10;UBERON:0003408,4.94e-09,10;UBERON:0001042,4.94e-09,10;UBERON:0009145,4.94e-09,10;UBERON:0006562,2.72e-08,11;UBERON:0009722,2.72e-08,11;UBERON:0007690,2.72e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0,0.257575567634187,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0.651083453856419,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0,0.469737994575059,0.323745888736263,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0.710019185033229,0,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0.394061520403854,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.247528499761764,0,0,0,0,0.462145851343933,0.15350367472613,0.413509717453592,0.214840489736547,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0.583209226766509,0.173624994933292,0,0,1.52581736317083,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0.104421949505455,0.269604531922708,0,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0.353024506766001,0.451961481561065,0.137041924646751,0.397429223405979,0.253243183823515,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0.407712618220842,0.313808538937,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,1.07493555978762,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0.275078873194468,0,0,0,0.303747783290123,0.335434687599266,0.315222829196793,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0.342173675768659,0.704815022316672,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0,0.506827321959218,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0,0,0,1.06287460050841,0.495743057036009,1.11728983594649,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0.25207169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| ||
|short_description=p29@LPP | |short_description=p29@LPP | ||
}} | }} |
Latest revision as of 07:26, 17 September 2015
Short description: | p29@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_LPP_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_ENST00000416784_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9J4E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.23e-21 | 4 |
hemolymphoid system gland | 4.23e-21 | 4 |
thymic region | 4.23e-21 | 4 |
pharyngeal gland | 4.23e-21 | 4 |
thymus primordium | 4.23e-21 | 4 |
pharyngeal epithelium | 2.04e-14 | 6 |
hemopoietic organ | 1.68e-12 | 7 |
immune organ | 1.68e-12 | 7 |
globus pallidus | 2.47e-11 | 2 |
pallidum | 2.47e-11 | 2 |
neural tissue | 3.35e-11 | 2 |
neck | 4.94e-09 | 10 |
gland of gut | 4.94e-09 | 10 |
chordate pharynx | 4.94e-09 | 10 |
pharyngeal region of foregut | 4.94e-09 | 10 |
pharynx | 2.72e-08 | 11 |
entire pharyngeal arch endoderm | 2.72e-08 | 11 |
early pharyngeal endoderm | 2.72e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.35e-11 | 2 |
neurofibroma | 3.35e-11 | 2 |
neuroectodermal tumor | 8.28e-09 | 10 |
peripheral nervous system neoplasm | 6.78e-08 | 3 |