FFCP PHASE1:Hg19::chr3:187871659..187871779,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |||
|TSSclassifier=strong | |||
|UniProt=C9J1K7,C9J4E3,C9J2R5,C9JT42,B7Z8W0 | |||
|association_with_transcript=0bp_to_ENST00000414139,ENST00000416784,ENST00000430340,ENST00000454789,NM_001167672,uc011bsg.1_5end | |||
|cluster_id=chr3:187871659..187871779,+ | |||
|description=CAGE_peak_1_at_LPP_5end | |||
|id=chr3:187871659..187871779,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.69e-08!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.37e-09,160;UBERON:0009142,3.37e-09,160;UBERON:0005256,8.12e-07,122 | |||
|phase1_expression=21.9830838917374,13.7024335290229,25.2308383331788,26.0190575718139,19.6662881548007,15.7020934338066,15.1979926900986,7.58063848112197,7.57438321779532,9.82935746006035,9.76921635161399,17.0384270261534,9.49561121622433,12.5004016489647,19.8838425436749,12.7741777825837,12.0538905604795,11.684961446198,12.6862527685532,19.2068850599789,18.9720642857155,13.1650983020797,15.170507317946,14.6455634827986,22.3465898478749,0,0,0,3.93364276848904,9.59573495243032,8.66970290570026,1.83884244895785,3.614471025339,2.58827807116751,6.66217924990594,3.12772311472327,4.9912074686924,12.7418943962332,10.4283112684474,9.11445657006578,13.4349284543955,19.7575136271578,13.9090806522461,6.39752250630085,8.69114670484262,8.49044214157357,10.4593066607558,7.40102198439286,9.60089749774821,14.0969272237854,15.369642391746,9.22280696565482,10.6871161028352,16.7826017731795,0,7.9061782607894,7.09555990150399,7.41587498668779,7.03992952453076,15.0836642725764,5.75403413219137,9.56568770541477,13.7629923758926,8.09827026012119,9.28669563611469,10.2129340444405,10.5879782329248,12.5624332628372,11.4726242052444,10.6422533905507,15.1349875658342,12.1531619875896,8.86094684834476,3.80259515361495,4.25208599930087,5.03180749220102,9.2109477540126,7.0583139635508,10.7686143087044,1.99508920618874,4.17725022118089,2.37463399894024,3.51992488922645,12.0150494477669,9.7846017924991,10.6682555641627,7.20712776664822,8.62128659931725,8.59358334620321,8.58648379081828,16.507176104174,17.6171156811282,16.0554755812596,13.2171328579026,4.48406850385229,4.74091352595139,21.4413649424078,15.3274197472174,13.5696989339676,10.6999357050034,6.8443675993054,11.8361951433683,9.74133642039557,8.13296335261767,6.77593587192126,7.53215241584312,10.2905468230706,9.73494029915131,9.23421367675135,17.759293697197,17.9627511560801,18.5473974870434,13.3457906845854,14.9822863730239,11.4989076185474,11.6708622978493,9.58051234004803,15.1196076012357,23.2778116657943,6.37130828648194,5.20866763085135,2.85135613334512,10.8414085735996,10.4949021146623,7.49584359314075,7.34009481336452,3.28451198768419,13.7092585392818,11.7673686144743,12.1652499261551,41.4471672733735,11.4019146149618,12.1469433751354,16.2647618573055,14.5387994084408,11.4428749979051,19.0868627292264,14.1124112387764,41.3117151006977,38.5809151584861,40.8431753473036,52.1296720480896,4.37154345951051,2.22470665670658,25.63924409872,30.1244445527732,20.741441840943,13.1169843367938,11.4398982156026,13.0010125465348,8.14925870203491,1.72046919021225,3.47140501607594,6.78369530308812,8.80948816040802,9.62913146790236,4.80688423034664,17.8307563826837,22.057508286576,30.7942963743497,6.0424397566372,6.84244895146661,9.03029612928227,14.7065232138347,8.1014194788176,13.8414578840324,13.9208211028225,11.2611480483322,3.06633274931766,4.74632829784064,6.22885929363385,3.9534125230819,11.6334079244498,2.61656431285521,22.8607097779847,10.0038104215018,31.1161574911064,38.1492705595922,12.7680617591409,17.9416832045538,18.1473292740498,10.1133694851036,27.6977821505792,13.4710672069688,13.5673379584171,16.3466021856526,14.404398112,10.0758215688533,5.61888138294577,2.85235910772225,5.38015249986484,10.0993668833638,13.1117084938187,11.3765153428821,15.311562844117,15.9684612505298,17.7720343622317,33.2640800038975,26.4575614328056,9.10161361938026,9.3420358436111,13.9718974581875,17.2663557423311,23.2733857006714,30.2894558407778,30.955267375701,24.3385655428687,7.37309190540137,55.7901766992361,24.1319849364981,31.3659213716152,37.5113870105503,32.1523891223929,48.9517026086695,22.8923733287855,43.5442937182467,27.0874874348132,74.7203971762579,28.9957180723243,17.2961280796129,63.1917074679574,26.4978018338694,15.0908927156334,6.3776081543888,9.54611422067921,10.6117700293931,15.368686972329,11.2650303073262,8.01738205799677,14.5125477021519,11.6067591402789,8.75945661781992,23.4674298494724,9.64861407289328,13.8134921352481,10.6804623447355,5.0531563716871,8.6363964029086,6.91197229320217,9.3994301654558,9.0441057640563,5.01122721412534,6.16903609688851,4.98875840192608,6.08286541888573,4.23221872641029,10.3341763647451,11.2193419042757,20.57870056657,16.1709582524096,13.9430538304014,6.87979051674338,14.1789577603537,7.06340959063441,11.3149363459664,18.3577557019422,7.24351883696929,0,3.82010095164197,8.70331384490178,14.009757128344,6.23960871167747,15.8764476227801,10.549666852732,46.1416168346779,11.2605829253638,11.5746378144153,16.1716029399409,0,1.71697232418975,10.8335482678455,12.1682217872404,7.28292695214768,5.62403003920662,11.926731102119,8.3647307373008,5.10483579406235,4.94077695473735,2.30029607499127,11.8239177095026,3.08169519046291,3.10992173311158,3.45887888200707,3.28230326908588,8.8262073066115,12.9876064689814,4.68869788840188,8.55362230113526,12.0308166462889,8.70994867747361,40.5873534335421,20.519988435201,20.9260833039974,7.84719658284165,35.0326349703578,10.7296933755565,8.45302752556,41.4863461872398,19.7614130131596,6.17297698229141,5.6739652809311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|short_description=p1@LPP | |||
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Latest revision as of 07:27, 17 September 2015
Short description: | p1@LPP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414139, ENST00000416784, ENST00000430340, ENST00000454789, NM_001167672, uc011bsg.1_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9J1K7C9J4E3C9J2R5C9JT42B7Z8W0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 3.37e-09 | 160 |
entire embryonic mesenchyme | 3.37e-09 | 160 |
trunk mesenchyme | 8.12e-07 | 122 |