FFCP PHASE1:Hg19::chr17:72426891..72426918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55890 | |EntrezGene=55890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13309 | |HGNC=13309 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ84 | |UniProt=Q9NQ84 | ||
|association_with_transcript=-133bp_to_ENST00000392627_5end | |association_with_transcript=-133bp_to_ENST00000392627_5end | ||
|cluster_id=chr17:72426891..72426918,+ | |||
|description=CAGE_peak_10_at_GPRC5C_5end | |description=CAGE_peak_10_at_GPRC5C_5end | ||
|id=chr17:72426891..72426918,+ | |id=chr17:72426891..72426918,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.29e-09!254;CL:0000223!3.39e-07!59;CL:0002274!9.73e-07!5;CL:0000457!9.73e-07!5;CL:0002191!9.73e-07!5;CL:0000097!9.73e-07!5;CL:0000831!9.73e-07!5;CL:0002028!9.73e-07!5 | |ontology_enrichment_celltype=CL:0000066!2.29e-09!254;CL:0000223!3.39e-07!59;CL:0002274!9.73e-07!5;CL:0000457!9.73e-07!5;CL:0002191!9.73e-07!5;CL:0000097!9.73e-07!5;CL:0000831!9.73e-07!5;CL:0002028!9.73e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.04e-34;2!CL:0001016;5.04e-34;2!CL:0000453;1.60e-14;5!CL:0000097;1.83e-14;5!CL:0000840;2.45e-12;5!CL:0000990;1.12e-08;8!CL:0000163;1.21e-08;9!CL:0000451;2.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0000453,1.60e-14,5;CL:0000097,1.83e-14,5;CL:0002028,1.83e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000990,1.12e-08,8;CL:0000163,1.21e-08,9;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.62e-23;3 | |||
|ontology_enrichment_disease=DOID:305!5.54e-14!106;DOID:0050687!2.85e-10!143;DOID:3119!3.14e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
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| ||
|short_description=p10@GPRC5C | |short_description=p10@GPRC5C | ||
}} | }} |
Latest revision as of 07:27, 17 September 2015
Short description: | p10@GPRC5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GPRC5C_5end |
Coexpression cluster: | NA |
Association with transcript: | -133bp_to_ENST00000392627_5end |
EntrezGene: | GPRC5C |
HGNC: | 13309 |
UniProt: | Q9NQ84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
Langerhans cell | 1.60e-14 | 5 |
mast cell | 1.83e-14 | 5 |
basophil mast progenitor cell | 1.83e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
conventional dendritic cell | 1.12e-08 | 8 |
endocrine cell | 1.21e-08 | 9 |
dendritic cell | 2.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |