FFCP PHASE1:Hg19::chr3:187930406..187930417,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:187930406..187930417,+
|short_description=p8@LPP
|description=CAGE_peak_8_at_LPP_5end
|association_with_transcript=-11bp_to_ENST00000420410_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4026 | |EntrezGene=4026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |HGNC=6679 | ||
|TSSclassifier=strong | |||
|UniProt=C9J5C8 | |UniProt=C9J5C8 | ||
|association_with_transcript=-11bp_to_ENST00000420410_5end | |||
|cluster_id=chr3:187930406..187930417,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_8_at_LPP_5end | |||
|id=chr3:187930406..187930417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002594;6.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.13e-10;65!UBERON:0006965;6.49e-07;2!UBERON:0004872;9.86e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-15!115;UBERON:0000481!6.56e-12!347;UBERON:0000477!1.43e-09!286;UBERON:0000468!1.99e-09!659;UBERON:0000062!3.20e-09!511;UBERON:0005256!3.57e-08!143;UBERON:0000467!3.94e-08!625;UBERON:0000480!4.84e-08!626;UBERON:0005156!5.26e-08!59;UBERON:0000990!5.26e-08!59;UBERON:0004111!1.78e-07!241;UBERON:0000483!2.16e-07!309;UBERON:0000119!2.17e-07!312;UBERON:0002100!2.78e-07!216;UBERON:0000059!5.89e-07!11;UBERON:0001155!6.27e-07!9;UBERON:0000922!6.31e-07!612;UBERON:0003103!8.42e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.65e-09;3!UBERON:0004054;1.65e-09;3!UBERON:0000160;3.16e-07;17!UBERON:0005904;3.22e-07;4!UBERON:0005409;5.18e-07;22!UBERON:0001310;6.25e-07;4!UBERON:0000059;8.01e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.41e-20,114;UBERON:0006947,1.04e-09,3;UBERON:0004054,1.04e-09,3;UBERON:0005409,2.36e-09,25;UBERON:0005904,2.29e-07,4;UBERON:0000160,2.76e-07,17;UBERON:0000059,7.68e-07,11 | |||
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| ||
|short_description=p8@LPP | |||
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Latest revision as of 07:35, 17 September 2015
Short description: | p8@LPP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LPP_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -11bp_to_ENST00000420410_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | C9J5C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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adult organism | 8.41e-20 | 114 |
male genital duct | 1.04e-09 | 3 |
internal male genitalia | 1.04e-09 | 3 |
gastrointestinal system | 2.36e-09 | 25 |
duct of male reproductive system | 2.29e-07 | 4 |
intestine | 2.76e-07 | 17 |
large intestine | 7.68e-07 | 11 |