FFCP PHASE1:Hg19::chr12:129304541..129304557,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121260 | |EntrezGene=121260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |HGNC=23090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_ENST00000535272_5end | |association_with_transcript=-129bp_to_ENST00000535272_5end | ||
|cluster_id=chr12:129304541..129304557,- | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_6_at_SLC15A4_5end | |description=CAGE_peak_6_at_SLC15A4_5end | ||
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|ontology_enrichment_celltype=CL:0000946!8.78e-09!1;CL:0000786!8.78e-09!1;CL:0000980!8.78e-09!1;CL:0000342!2.46e-08!1;CL:0002565!2.46e-08!1;CL:0000945!1.70e-07!24;CL:0000826!1.70e-07!24 | |ontology_enrichment_celltype=CL:0000946!8.78e-09!1;CL:0000786!8.78e-09!1;CL:0000980!8.78e-09!1;CL:0000342!2.46e-08!1;CL:0002565!2.46e-08!1;CL:0000945!1.70e-07!24;CL:0000826!1.70e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000946;4.20e-29;1!CL:0000786;4.20e-29;1!CL:0000945;2.88e-19;24 | |ontology_enrichment_celltype_v019=CL:0000946;4.20e-29;1!CL:0000786;4.20e-29;1!CL:0000945;2.88e-19;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.20e-29,1;CL:0000786,4.20e-29,1;CL:0000980,4.20e-29,1;CL:0000945,2.81e-19,24;CL:0000826,2.81e-19,24;CL:0000785,2.74e-15,2;CL:0000955,2.74e-15,2;CL:0000818,2.74e-15,2;CL:0000954,2.74e-15,2;CL:0000816,2.74e-15,2;CL:0000817,1.20e-10,3;CL:0000838,3.52e-09,52;CL:0000542,5.15e-09,53;CL:0000051,5.15e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-15;2 | |ontology_enrichment_development_v019=CL:0000954;2.74e-15;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@SLC15A4 | |short_description=p6@SLC15A4 | ||
}} | }} |
Latest revision as of 07:39, 17 September 2015
Short description: | p6@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC15A4_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -129bp_to_ENST00000535272_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.20e-29 | 1 |
plasma cell | 4.20e-29 | 1 |
plasmablast | 4.20e-29 | 1 |
lymphocyte of B lineage | 2.81e-19 | 24 |
pro-B cell | 2.81e-19 | 24 |
mature B cell | 2.74e-15 | 2 |
pre-B-II cell | 2.74e-15 | 2 |
transitional stage B cell | 2.74e-15 | 2 |
small pre-B-II cell | 2.74e-15 | 2 |
immature B cell | 2.74e-15 | 2 |
precursor B cell | 1.20e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.52e-09 | 52 |
lymphocyte | 5.15e-09 | 53 |
common lymphoid progenitor | 5.15e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.80e-38 | 3 |
myelencephalon | 1.80e-38 | 3 |
future myelencephalon | 1.80e-38 | 3 |
brainstem | 7.84e-20 | 6 |
spleen | 6.73e-11 | 3 |
gastrointestinal system mesentery | 6.73e-11 | 3 |
stomach region | 6.73e-11 | 3 |
mesentery | 6.73e-11 | 3 |
gastrointestinal system serosa | 6.73e-11 | 3 |
mesentery of stomach | 6.73e-11 | 3 |
gut mesentery | 6.73e-11 | 3 |
dorsal mesentery | 6.73e-11 | 3 |
dorsal mesogastrium | 6.73e-11 | 3 |
peritoneal cavity | 6.73e-11 | 3 |
spleen primordium | 6.73e-11 | 3 |
segmental subdivision of hindbrain | 1.94e-10 | 12 |
hindbrain | 1.94e-10 | 12 |
presumptive hindbrain | 1.94e-10 | 12 |
segmental subdivision of nervous system | 1.04e-09 | 13 |
posterior neural tube | 1.53e-08 | 15 |
chordal neural plate | 1.53e-08 | 15 |