FFCP PHASE1:Hg19::chr15:37393449..37393528,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4212 | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |HGNC=7001 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DI2,B7Z6F6,O14770 | |UniProt=Q96DI2,B7Z6F6,O14770 | ||
|association_with_transcript=0bp_to_ENST00000340545,ENST00000558313,NM_001220482,NM_002399,uc001zjt.2,uc001zju.2_5end | |association_with_transcript=0bp_to_ENST00000340545,ENST00000558313,NM_001220482,NM_002399,uc001zjt.2,uc001zju.2_5end | ||
|cluster_id=chr15:37393449..37393528,- | |||
|description=CAGE_peak_4_at_MEIS2_5end | |description=CAGE_peak_4_at_MEIS2_5end | ||
|id=chr15:37393449..37393528,- | |id=chr15:37393449..37393528,- | ||
|ontology_enrichment_celltype=CL:0000055!2.09e-08!180;CL:0002620!2.58e-07!23;CL:0000057!7.44e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.09e-08!180;CL:0002620!2.58e-07!23;CL:0000057!7.44e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.86e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.59e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.24e-18!365;UBERON:0000481!1.99e-14!347;UBERON:0000468!8.22e-12!659;UBERON:0004111!8.18e-11!241;UBERON:0000467!3.45e-10!625;UBERON:0000480!4.19e-10!626;UBERON:0000483!1.17e-09!309;UBERON:0000062!2.32e-09!511;UBERON:0000477!2.85e-09!286;UBERON:0000119!4.73e-09!312;UBERON:0000025!3.93e-08!194;UBERON:0005743!6.27e-08!86;UBERON:0002050!9.18e-08!605;UBERON:0005423!9.18e-08!605;UBERON:0000922!1.30e-07!612;UBERON:0000923!1.48e-07!604;UBERON:0005291!1.48e-07!604;UBERON:0006598!1.48e-07!604;UBERON:0002532!1.48e-07!604;UBERON:0004921!2.42e-07!129;UBERON:0004185!2.42e-07!129;UBERON:0001017!2.57e-07!82;UBERON:0002346!3.12e-07!90;UBERON:0000073!3.15e-07!94;UBERON:0001016!3.15e-07!94;UBERON:0001007!3.52e-07!155;UBERON:0001555!3.52e-07!155;UBERON:0007026!3.52e-07!155;UBERON:0000955!5.40e-07!69;UBERON:0006238!5.40e-07!69;UBERON:0003104!6.86e-07!238;UBERON:0009142!6.86e-07!238 | |ontology_enrichment_uberon=UBERON:0000475!1.24e-18!365;UBERON:0000481!1.99e-14!347;UBERON:0000468!8.22e-12!659;UBERON:0004111!8.18e-11!241;UBERON:0000467!3.45e-10!625;UBERON:0000480!4.19e-10!626;UBERON:0000483!1.17e-09!309;UBERON:0000062!2.32e-09!511;UBERON:0000477!2.85e-09!286;UBERON:0000119!4.73e-09!312;UBERON:0000025!3.93e-08!194;UBERON:0005743!6.27e-08!86;UBERON:0002050!9.18e-08!605;UBERON:0005423!9.18e-08!605;UBERON:0000922!1.30e-07!612;UBERON:0000923!1.48e-07!604;UBERON:0005291!1.48e-07!604;UBERON:0006598!1.48e-07!604;UBERON:0002532!1.48e-07!604;UBERON:0004921!2.42e-07!129;UBERON:0004185!2.42e-07!129;UBERON:0001017!2.57e-07!82;UBERON:0002346!3.12e-07!90;UBERON:0000073!3.15e-07!94;UBERON:0001016!3.15e-07!94;UBERON:0001007!3.52e-07!155;UBERON:0001555!3.52e-07!155;UBERON:0007026!3.52e-07!155;UBERON:0000955!5.40e-07!69;UBERON:0006238!5.40e-07!69;UBERON:0003104!6.86e-07!238;UBERON:0009142!6.86e-07!238 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.98e-10,240;UBERON:0011216,2.51e-09,223;UBERON:0000483,5.48e-08,306;UBERON:0010314,1.45e-07,132;UBERON:0000025,1.56e-07,192;UBERON:0000119,2.13e-07,309 | |||
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| ||
|short_description=p4@MEIS2 | |short_description=p4@MEIS2 | ||
}} | }} |
Latest revision as of 08:34, 17 September 2015
Short description: | p4@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MEIS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000340545, ENST00000558313, NM_001220482, NM_002399, uc001zjt.2, uc001zju.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | Q96DI2B7Z6F6O14770 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.59e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 6.98e-10 | 240 |
organ system subdivision | 2.51e-09 | 223 |
epithelium | 5.48e-08 | 306 |
structure with developmental contribution from neural crest | 1.45e-07 | 132 |
tube | 1.56e-07 | 192 |
cell layer | 2.13e-07 | 309 |