FFCP PHASE1:Hg19::chr11:2160078..2160088,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=115bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=115bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2160078..2160088,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_52_at_IGF2_5end | |description=CAGE_peak_52_at_IGF2_5end | ||
|id=chr11:2160078..2160088,- | |id=chr11:2160078..2160088,- | ||
|ontology_enrichment_celltype=CL:0002537!7.48e-07!5 | |ontology_enrichment_celltype=CL:0002537!7.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.35e-23;19!CL:0002537;8.10e-10;5!CL:0002541;1.43e-09;3!CL:0002577;2.07e-09;3!CL:0002575;3.77e-07;2!CL:0002536;9.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.69e-23,19;CL:0002537,9.32e-10,5;CL:0002541,1.29e-09,3;CL:0002577,2.08e-09,3;CL:0002575,3.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.25e-08;11!UBERON:0009497;5.68e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.14e-17!14;UBERON:0000158!2.14e-17!14;UBERON:0004119!1.78e-13!169;UBERON:0000925!1.78e-13!169;UBERON:0006595!1.78e-13!169;UBERON:0007023!8.90e-13!115;UBERON:0000478!1.43e-12!24;UBERON:0001007!2.23e-11!155;UBERON:0001555!2.23e-11!155;UBERON:0007026!2.23e-11!155;UBERON:0000077!1.42e-10!130;UBERON:0004921!5.43e-10!129;UBERON:0004185!5.43e-10!129;UBERON:0003124!6.33e-10!7;UBERON:0000305!4.04e-09!7;UBERON:0000481!4.04e-08!347;UBERON:0004871!9.45e-08!8 | |ontology_enrichment_uberon=UBERON:0005631!2.14e-17!14;UBERON:0000158!2.14e-17!14;UBERON:0004119!1.78e-13!169;UBERON:0000925!1.78e-13!169;UBERON:0006595!1.78e-13!169;UBERON:0007023!8.90e-13!115;UBERON:0000478!1.43e-12!24;UBERON:0001007!2.23e-11!155;UBERON:0001555!2.23e-11!155;UBERON:0007026!2.23e-11!155;UBERON:0000077!1.42e-10!130;UBERON:0004921!5.43e-10!129;UBERON:0004185!5.43e-10!129;UBERON:0003124!6.33e-10!7;UBERON:0000305!4.04e-09!7;UBERON:0000481!4.04e-08!347;UBERON:0004871!9.45e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.72e-24;24!UBERON:0005631;1.79e-22;10!UBERON:0000158;1.79e-22;10!UBERON:0000305;9.68e-15;7!UBERON:0001987;3.42e-12;4!UBERON:0003124;1.43e-09;3!UBERON:0000920;1.43e-09;3!UBERON:0000922;1.82e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.88e-33,14;UBERON:0000158,7.88e-33,14;UBERON:0000478,1.18e-23,24;UBERON:0003124,4.48e-20,7;UBERON:0000305,1.21e-14,7;UBERON:0004871,1.04e-12,8;UBERON:0001987,3.55e-12,4;UBERON:0004340,3.55e-12,4;UBERON:0000920,1.29e-09,3;UBERON:0004923,2.93e-08,66 | |||
|phase1_expression=0,0.428201047781966,0,0,0,1.74467704820074,0,0,0,0.245733936501509,0,2.40285509343189,3.16520373874144,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,2.37600571456411,1.7308685049499,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0,0,0,0,0.26593811658487,2.08014873822732,0.514414748524284,0,0,0.857867961948885,1.08524321078289,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,1.08506009479894,0.207970861530807,0.535286966391485,0.630809660135739,0.468565659970853,0,0,0,0,0,0,6.85304051119592,10.6374461381365,0,0,0,2.42502057157008,3.32870879020994,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,6.64726972753922,0.40101294060657,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,1.54227252690289,0.812839312631559,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,1.06838442776085,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.855877976067841,0,0,0.539617372749944,0,0,0,0,0,1.46290121726877,0,0,0.818999468447914,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,2.63602642174982,0,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,0,0,0,0,1.31857361344705,0,0,0.852408440419239,4.05865624054073,9.50286978664444,9.82914246717543,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0.922255617552241,0,0,3.19001159731919,2.74792780205587,20.7883562647268,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,2.4441205797345,0,0,0,0.202203398942031,8.02577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0,0,0.213452994739353,1.19885765749278,0,0,6.00582492516876,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0.429226048136571,1.11585728720936,0.671834724867263,0.360299883542404,1.16495949527454,2.52106183383116,1.81314888438566,2.35912403489647,1.67326718575073,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.524545881349981,0.211200673038813,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,22.5261711150776,0,0,0,0,0.106787412567695,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,1.23069818544453,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,1.79024599904647,1.27857558193737,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,10.2007725687035,0,0,0,0,0,0,0.313972371402056,0,0.840816489941367,4.56579360254748,0,0,0.78624198594322,0,0,2.26015753993353,1.60342272946051,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0.487671699929078,0,1.33461648913121,26.6757319207786,12.6284858195376,0,1.98950775161368,0,0,0,0,0,1.31135736302374,0,0.490296643507811,0,0,0,4.226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,1.46067277649303,0.458729283404541,0,0.631086248772738,0,0.436350690340377,2.645134202577,0,0,0,0,0,0,0,0,0,0,1.74291005901951,0.267964130156178,0,0,0.639701945702943,2.85677317756488,0.193766729508018,0.372448285775147,0,0.12729431655633,0.606351566874658,0.435433495793923,10.6092323336437,0,0.0717222053926763,6.32054677437425,0.0814032686109745,0,0,1.3473780315988,9.38563769613817,0.488965776731466,1.62758471326295,1.33151354837103,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0,0,0,1.74467704820074,0,0,0,0.245733936501509,0,2.40285509343189,3.16520373874144,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,2.37600571456411,1.7308685049499,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0,0,0,0,0.26593811658487,2.08014873822732,0.514414748524284,0,0,0.857867961948885,1.08524321078289,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,1.08506009479894,0.207970861530807,0.535286966391485,0.630809660135739,0.468565659970853,0,0,0,0,0,0,6.85304051119592,10.6374461381365,0,0,0,2.42502057157008,3.32870879020994,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,6.64726972753922,0.40101294060657,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,1.54227252690289,0.812839312631559,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,1.06838442776085,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.855877976067841,0,0,0.539617372749944,0,0,0,0,0,1.46290121726877,0,0,0.818999468447914,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,2.63602642174982,0,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69262196843137,0,0,0,0,1.31857361344705,0,0,0.852408440419239,4.05865624054073,9.50286978664444,9.82914246717543,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0.922255617552241,0,0,3.19001159731919,2.74792780205587,20.7883562647268,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,2.4441205797345,0,0,0,0.202203398942031,8.02577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.758238955541855,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0,0,0,0.213452994739353,1.19885765749278,0,0,6.00582492516876,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0.429226048136571,1.11585728720936,0.671834724867263,0.360299883542404,1.16495949527454,2.52106183383116,1.81314888438566,2.35912403489647,1.67326718575073,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.524545881349981,0.211200673038813,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,22.5261711150776,0,0,0,0,0.106787412567695,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,1.23069818544453,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,1.79024599904647,1.27857558193737,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,10.2007725687035,0,0,0,0,0,0,0.313972371402056,0,0.840816489941367,4.56579360254748,0,0,0.78624198594322,0,0,2.26015753993353,1.60342272946051,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0.487671699929078,0,1.33461648913121,26.6757319207786,12.6284858195376,0,1.98950775161368,0,0,0,0,0,1.31135736302374,0,0.490296643507811,0,0,0,4.226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,1.46067277649303,0.458729283404541,0,0.631086248772738,0,0.436350690340377,2.645134202577,0,0,0,0,0,0,0,0,0,0,1.74291005901951,0.267964130156178,0,0,0.639701945702943,2.85677317756488,0.193766729508018,0.372448285775147,0,0.12729431655633,0.606351566874658,0.435433495793923,10.6092323336437,0,0.0717222053926763,6.32054677437425,0.0814032686109745,0,0,1.3473780315988,9.38563769613817,0.488965776731466,1.62758471326295,1.33151354837103,0.201273793591026,0 | ||
|short_description=p52@IGF2 | |short_description=p52@IGF2 | ||
}} | }} |
Latest revision as of 08:35, 17 September 2015
Short description: | p52@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 115bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.69e-23 | 19 |
amnion mesenchymal stem cell | 9.32e-10 | 5 |
chorionic membrane mesenchymal stem cell | 1.29e-09 | 3 |
placental epithelial cell | 2.08e-09 | 3 |
central nervous system pericyte | 3.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.88e-33 | 14 |
membranous layer | 7.88e-33 | 14 |
extraembryonic structure | 1.18e-23 | 24 |
chorion | 4.48e-20 | 7 |
amnion | 1.21e-14 | 7 |
somatic layer of lateral plate mesoderm | 1.04e-12 | 8 |
placenta | 3.55e-12 | 4 |
allantois | 3.55e-12 | 4 |
egg chorion | 1.29e-09 | 3 |
organ component layer | 2.93e-08 | 66 |