FFCP PHASE1:Hg19::chr11:2160078..2160088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=115bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=115bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2160078..2160088,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_52_at_IGF2_5end | |description=CAGE_peak_52_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002537!7.48e-07!5 | |ontology_enrichment_celltype=CL:0002537!7.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.35e-23;19!CL:0002537;8.10e-10;5!CL:0002541;1.43e-09;3!CL:0002577;2.07e-09;3!CL:0002575;3.77e-07;2!CL:0002536;9.85e-07;2 | |ontology_enrichment_celltype_v019=CL:0000349;6.35e-23;19!CL:0002537;8.10e-10;5!CL:0002541;1.43e-09;3!CL:0002577;2.07e-09;3!CL:0002575;3.77e-07;2!CL:0002536;9.85e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.69e-23,19;CL:0002537,9.32e-10,5;CL:0002541,1.29e-09,3;CL:0002577,2.08e-09,3;CL:0002575,3.52e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.25e-08;11!UBERON:0009497;5.68e-07;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.25e-08;11!UBERON:0009497;5.68e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.14e-17!14;UBERON:0000158!2.14e-17!14;UBERON:0004119!1.78e-13!169;UBERON:0000925!1.78e-13!169;UBERON:0006595!1.78e-13!169;UBERON:0007023!8.90e-13!115;UBERON:0000478!1.43e-12!24;UBERON:0001007!2.23e-11!155;UBERON:0001555!2.23e-11!155;UBERON:0007026!2.23e-11!155;UBERON:0000077!1.42e-10!130;UBERON:0004921!5.43e-10!129;UBERON:0004185!5.43e-10!129;UBERON:0003124!6.33e-10!7;UBERON:0000305!4.04e-09!7;UBERON:0000481!4.04e-08!347;UBERON:0004871!9.45e-08!8 | |ontology_enrichment_uberon=UBERON:0005631!2.14e-17!14;UBERON:0000158!2.14e-17!14;UBERON:0004119!1.78e-13!169;UBERON:0000925!1.78e-13!169;UBERON:0006595!1.78e-13!169;UBERON:0007023!8.90e-13!115;UBERON:0000478!1.43e-12!24;UBERON:0001007!2.23e-11!155;UBERON:0001555!2.23e-11!155;UBERON:0007026!2.23e-11!155;UBERON:0000077!1.42e-10!130;UBERON:0004921!5.43e-10!129;UBERON:0004185!5.43e-10!129;UBERON:0003124!6.33e-10!7;UBERON:0000305!4.04e-09!7;UBERON:0000481!4.04e-08!347;UBERON:0004871!9.45e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.72e-24;24!UBERON:0005631;1.79e-22;10!UBERON:0000158;1.79e-22;10!UBERON:0000305;9.68e-15;7!UBERON:0001987;3.42e-12;4!UBERON:0003124;1.43e-09;3!UBERON:0000920;1.43e-09;3!UBERON:0000922;1.82e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000478;7.72e-24;24!UBERON:0005631;1.79e-22;10!UBERON:0000158;1.79e-22;10!UBERON:0000305;9.68e-15;7!UBERON:0001987;3.42e-12;4!UBERON:0003124;1.43e-09;3!UBERON:0000920;1.43e-09;3!UBERON:0000922;1.82e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.88e-33,14;UBERON:0000158,7.88e-33,14;UBERON:0000478,1.18e-23,24;UBERON:0003124,4.48e-20,7;UBERON:0000305,1.21e-14,7;UBERON:0004871,1.04e-12,8;UBERON:0001987,3.55e-12,4;UBERON:0004340,3.55e-12,4;UBERON:0000920,1.29e-09,3;UBERON:0004923,2.93e-08,66 | |||
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| ||
|short_description=p52@IGF2 | |short_description=p52@IGF2 | ||
}} | }} |
Latest revision as of 08:35, 17 September 2015
Short description: | p52@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 115bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.69e-23 | 19 |
amnion mesenchymal stem cell | 9.32e-10 | 5 |
chorionic membrane mesenchymal stem cell | 1.29e-09 | 3 |
placental epithelial cell | 2.08e-09 | 3 |
central nervous system pericyte | 3.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.88e-33 | 14 |
membranous layer | 7.88e-33 | 14 |
extraembryonic structure | 1.18e-23 | 24 |
chorion | 4.48e-20 | 7 |
amnion | 1.21e-14 | 7 |
somatic layer of lateral plate mesoderm | 1.04e-12 | 8 |
placenta | 3.55e-12 | 4 |
allantois | 3.55e-12 | 4 |
egg chorion | 1.29e-09 | 3 |
organ component layer | 2.93e-08 | 66 |