FFCP PHASE1:Hg19::chr9:35732514..35732530,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10488 | |EntrezGene=10488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2347 | |HGNC=2347 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-64bp_to_ENST00000486056_5end | |association_with_transcript=-64bp_to_ENST00000486056_5end | ||
|cluster_id=chr9:35732514..35732530,+ | |||
|description=CAGE_peak_5_at_CREB3_5end | |description=CAGE_peak_5_at_CREB3_5end | ||
|id=chr9:35732514..35732530,+ | |id=chr9:35732514..35732530,+ | ||
|ontology_enrichment_celltype=CL:0000222!3.70e-20!119;CL:0000548!8.92e-16!679;CL:0000004!8.92e-16!679;CL:0000255!8.92e-16!679;CL:0000012!4.36e-15!682;CL:0000192!8.42e-15!42;CL:0000514!8.42e-15!42;CL:0000144!1.44e-14!625;CL:0000359!4.66e-14!32;CL:0000187!1.25e-12!54;CL:0002371!1.45e-12!591;CL:0000680!1.87e-12!57;CL:0000056!1.87e-12!57;CL:0000355!1.87e-12!57;CL:0000183!4.69e-12!59;CL:0000055!1.50e-11!180;CL:0000220!3.35e-11!246;CL:0002321!1.35e-10!248;CL:0000393!3.72e-10!60;CL:0000211!3.72e-10!60;CL:0000213!3.04e-09!57;CL:0000215!3.04e-09!57;CL:0000003!9.43e-08!722;CL:0002139!1.08e-07!24;CL:0000071!1.39e-07!18;CL:0002546!1.39e-07!18 | |ontology_enrichment_celltype=CL:0000222!3.70e-20!119;CL:0000548!8.92e-16!679;CL:0000004!8.92e-16!679;CL:0000255!8.92e-16!679;CL:0000012!4.36e-15!682;CL:0000192!8.42e-15!42;CL:0000514!8.42e-15!42;CL:0000144!1.44e-14!625;CL:0000359!4.66e-14!32;CL:0000187!1.25e-12!54;CL:0002371!1.45e-12!591;CL:0000680!1.87e-12!57;CL:0000056!1.87e-12!57;CL:0000355!1.87e-12!57;CL:0000183!4.69e-12!59;CL:0000055!1.50e-11!180;CL:0000220!3.35e-11!246;CL:0002321!1.35e-10!248;CL:0000393!3.72e-10!60;CL:0000211!3.72e-10!60;CL:0000213!3.04e-09!57;CL:0000215!3.04e-09!57;CL:0000003!9.43e-08!722;CL:0002139!1.08e-07!24;CL:0000071!1.39e-07!18;CL:0002546!1.39e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.22e-20;32!CL:0000192;4.01e-15;43!CL:0000187;3.05e-08;55!CL:0002539;2.04e-07;10!CL:0002139;2.88e-07;24!CL:0000213;5.34e-07;58!CL:0000215;5.34e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.81e-24,121;CL:0000359,1.30e-21,32;CL:0000192,1.05e-20,43;CL:0000514,1.05e-20,43;CL:0000187,1.70e-15,55;CL:0000680,3.40e-15,58;CL:0000056,3.40e-15,58;CL:0000355,3.40e-15,58;CL:0002321,6.82e-13,250;CL:0000393,1.02e-12,61;CL:0000211,1.02e-12,61;CL:0000213,1.04e-10,58;CL:0000215,1.04e-10,58;CL:0000723,8.40e-08,433;CL:0000048,1.10e-07,427;CL:0002539,1.48e-07,10;CL:0002139,1.97e-07,24;CL:0000115,2.24e-07,36;CL:0002078,2.62e-07,45;CL:0000071,3.93e-07,18;CL:0002546,3.93e-07,18;CL:0000034,4.53e-07,441;CL:1000413,5.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;4.01e-15;43!CL:0000355;2.02e-07;58!CL:0000222;5.08e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;7.85e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.03e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.80e-19!79;UBERON:0007798!6.80e-19!79;UBERON:0000055!6.97e-19!69;UBERON:0001637!1.01e-18!42;UBERON:0003509!1.01e-18!42;UBERON:0004572!1.01e-18!42;UBERON:0001981!5.38e-18!60;UBERON:0007500!5.38e-18!60;UBERON:0004537!5.38e-18!60;UBERON:0006965!5.38e-18!60;UBERON:0004872!1.88e-17!84;UBERON:0000490!2.26e-16!138;UBERON:0003914!7.40e-16!118;UBERON:0004573!3.79e-15!33;UBERON:0004571!3.79e-15!33;UBERON:0004535!1.72e-11!110;UBERON:0005256!2.61e-11!143;UBERON:0002100!2.79e-11!216;UBERON:0001134!6.32e-11!61;UBERON:0002036!6.32e-11!61;UBERON:0003082!6.32e-11!61;UBERON:0001009!7.71e-11!113;UBERON:0002385!2.60e-10!63;UBERON:0001015!2.60e-10!63;UBERON:0000383!2.60e-10!63;UBERON:0000914!3.60e-10!83;UBERON:0002329!3.60e-10!83;UBERON:0003077!3.60e-10!83;UBERON:0003059!3.60e-10!83;UBERON:0007282!3.60e-10!83;UBERON:0009618!3.60e-10!83;UBERON:0007285!3.60e-10!83;UBERON:0000486!1.32e-09!82;UBERON:0004290!1.56e-09!70;UBERON:0000947!3.69e-08!21;UBERON:0010191!3.69e-08!21;UBERON:0001986!1.39e-07!18;UBERON:0004638!1.39e-07!18;UBERON:0004852!1.39e-07!18;UBERON:0000477!1.55e-07!286;UBERON:0000926!1.91e-07!448;UBERON:0004120!1.91e-07!448;UBERON:0006603!1.91e-07!448;UBERON:0003104!2.97e-07!238;UBERON:0009142!2.97e-07!238;UBERON:0004111!3.63e-07!241 | |ontology_enrichment_uberon=UBERON:0002049!6.80e-19!79;UBERON:0007798!6.80e-19!79;UBERON:0000055!6.97e-19!69;UBERON:0001637!1.01e-18!42;UBERON:0003509!1.01e-18!42;UBERON:0004572!1.01e-18!42;UBERON:0001981!5.38e-18!60;UBERON:0007500!5.38e-18!60;UBERON:0004537!5.38e-18!60;UBERON:0006965!5.38e-18!60;UBERON:0004872!1.88e-17!84;UBERON:0000490!2.26e-16!138;UBERON:0003914!7.40e-16!118;UBERON:0004573!3.79e-15!33;UBERON:0004571!3.79e-15!33;UBERON:0004535!1.72e-11!110;UBERON:0005256!2.61e-11!143;UBERON:0002100!2.79e-11!216;UBERON:0001134!6.32e-11!61;UBERON:0002036!6.32e-11!61;UBERON:0003082!6.32e-11!61;UBERON:0001009!7.71e-11!113;UBERON:0002385!2.60e-10!63;UBERON:0001015!2.60e-10!63;UBERON:0000383!2.60e-10!63;UBERON:0000914!3.60e-10!83;UBERON:0002329!3.60e-10!83;UBERON:0003077!3.60e-10!83;UBERON:0003059!3.60e-10!83;UBERON:0007282!3.60e-10!83;UBERON:0009618!3.60e-10!83;UBERON:0007285!3.60e-10!83;UBERON:0000486!1.32e-09!82;UBERON:0004290!1.56e-09!70;UBERON:0000947!3.69e-08!21;UBERON:0010191!3.69e-08!21;UBERON:0001986!1.39e-07!18;UBERON:0004638!1.39e-07!18;UBERON:0004852!1.39e-07!18;UBERON:0000477!1.55e-07!286;UBERON:0000926!1.91e-07!448;UBERON:0004120!1.91e-07!448;UBERON:0006603!1.91e-07!448;UBERON:0003104!2.97e-07!238;UBERON:0009142!2.97e-07!238;UBERON:0004111!3.63e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.88e-18;42!UBERON:0003509;1.88e-18;42!UBERON:0004572;1.88e-18;42!UBERON:0004573;1.87e-17;33!UBERON:0004571;1.87e-17;33!UBERON:0007500;3.23e-14;56!UBERON:0001981;3.23e-14;56!UBERON:0004537;3.23e-14;56!UBERON:0000055;3.68e-12;65!UBERON:0003914;8.97e-11;74!UBERON:0002049;4.07e-10;75!UBERON:0007798;4.07e-10;75!UBERON:0000947;6.31e-09;21!UBERON:0010191;6.31e-09;21!UBERON:0003513;1.17e-07;7!UBERON:0004237;2.04e-07;10!UBERON:0004695;2.04e-07;10!UBERON:0002111;2.04e-07;10!UBERON:0004178;2.04e-07;10 | |||
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| ||
|short_description=p5@CREB3 | |short_description=p5@CREB3 | ||
}} | }} |
Latest revision as of 08:43, 17 September 2015
Short description: | p5@CREB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CREB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENST00000486056_5end |
EntrezGene: | CREB3 |
HGNC: | 2347 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.81e-24 | 121 |
vascular associated smooth muscle cell | 1.30e-21 | 32 |
smooth muscle cell | 1.05e-20 | 43 |
smooth muscle myoblast | 1.05e-20 | 43 |
muscle cell | 1.70e-15 | 55 |
muscle precursor cell | 3.40e-15 | 58 |
myoblast | 3.40e-15 | 58 |
multi-potent skeletal muscle stem cell | 3.40e-15 | 58 |
embryonic cell | 6.82e-13 | 250 |
electrically responsive cell | 1.02e-12 | 61 |
electrically active cell | 1.02e-12 | 61 |
lining cell | 1.04e-10 | 58 |
barrier cell | 1.04e-10 | 58 |
somatic stem cell | 8.40e-08 | 433 |
multi fate stem cell | 1.10e-07 | 427 |
aortic smooth muscle cell | 1.48e-07 | 10 |
endothelial cell of vascular tree | 1.97e-07 | 24 |
endothelial cell | 2.24e-07 | 36 |
meso-epithelial cell | 2.62e-07 | 45 |
blood vessel endothelial cell | 3.93e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.93e-07 | 18 |
stem cell | 4.53e-07 | 441 |
endothelial cell of artery | 5.01e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.03e-07 | 14 |