FFCP PHASE1:Hg19::chr4:2257102..2257110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10608 | |EntrezGene=10608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13906 | |HGNC=13906 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-141bp_to_ENST00000513372_5end | |association_with_transcript=-141bp_to_ENST00000513372_5end | ||
|cluster_id=chr4:2257102..2257110,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_MXD4_5end | |description=CAGE_peak_6_at_MXD4_5end | ||
|id=chr4:2257102..2257110,- | |id=chr4:2257102..2257110,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!3.31e-22!12;UBERON:0002028!3.31e-22!12;UBERON:0007277!3.31e-22!12;UBERON:0004732!1.69e-20!13;UBERON:0002680!3.04e-19!9;UBERON:0001895!3.04e-19!9;UBERON:0010092!3.04e-19!9;UBERON:0003076!9.21e-18!15;UBERON:0003057!9.21e-18!15;UBERON:0002037!6.23e-17!6;UBERON:0006215!6.23e-17!6;UBERON:0001017!5.61e-09!82;UBERON:0000955!1.42e-08!69;UBERON:0006238!1.42e-08!69;UBERON:0005743!1.63e-08!86;UBERON:0001049!2.85e-08!57;UBERON:0005068!2.85e-08!57;UBERON:0006241!2.85e-08!57;UBERON:0007135!2.85e-08!57;UBERON:0002616!5.67e-08!59;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000033!4.79e-07!123;UBERON:0003075!7.62e-07!86;UBERON:0007284!7.62e-07!86 | |ontology_enrichment_uberon=UBERON:0004733!3.31e-22!12;UBERON:0002028!3.31e-22!12;UBERON:0007277!3.31e-22!12;UBERON:0004732!1.69e-20!13;UBERON:0002680!3.04e-19!9;UBERON:0001895!3.04e-19!9;UBERON:0010092!3.04e-19!9;UBERON:0003076!9.21e-18!15;UBERON:0003057!9.21e-18!15;UBERON:0002037!6.23e-17!6;UBERON:0006215!6.23e-17!6;UBERON:0001017!5.61e-09!82;UBERON:0000955!1.42e-08!69;UBERON:0006238!1.42e-08!69;UBERON:0005743!1.63e-08!86;UBERON:0001049!2.85e-08!57;UBERON:0005068!2.85e-08!57;UBERON:0006241!2.85e-08!57;UBERON:0007135!2.85e-08!57;UBERON:0002616!5.67e-08!59;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000033!4.79e-07!123;UBERON:0003075!7.62e-07!86;UBERON:0007284!7.62e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.26e-09;53!UBERON:0002616;8.26e-09;53!UBERON:0001016;9.28e-08;83!UBERON:0000955;1.68e-07;68!UBERON:0001017;8.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p6@MXD4 | |short_description=p6@MXD4 | ||
}} | }} |
Latest revision as of 08:47, 17 September 2015
Short description: | p6@MXD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MXD4_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -141bp_to_ENST00000513372_5end |
EntrezGene: | MXD4 |
HGNC: | 13906 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |