FFCP PHASE1:Hg19::chr9:35754350..35754382,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29663 | |||
|TSSclassifier=strong | |||
|UniProt=Q1L6U9 | |||
|association_with_transcript=-76bp_to_NM_001044264_5end | |||
|cluster_id=chr9:35754350..35754382,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_4_at_MSMP_5end | |||
|id=chr9:35754350..35754382,- | |||
|ontology_enrichment_celltype=CL:0000071!1.59e-44!18;CL:0002546!1.59e-44!18;CL:0002139!6.63e-33!24;CL:0002543!9.97e-29!6;CL:0000115!4.13e-26!35;CL:0002618!3.87e-21!3;CL:0002078!2.63e-20!44;CL:1000413!3.54e-19!9;CL:0000213!7.42e-18!57;CL:0000215!7.42e-18!57;CL:0002545!4.26e-15!2;CL:0000076!9.58e-14!62;CL:0002544!4.61e-11!6;CL:0000342!7.59e-08!1;CL:0002565!7.59e-08!1;CL:0000222!2.94e-07!119;CL:0000066!9.89e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002543;9.87e-34;6!CL:0002545;7.14e-26;2!CL:0000071;1.81e-25;18!CL:0002139;2.27e-19;24!CL:0000115;1.77e-12;36!CL:0002544;1.44e-09;6!CL:0000076;1.22e-07;63!CL:0002078;2.00e-07;45!CL:1000413;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.17e-33,6;CL:0002545,5.56e-26,2;CL:0000071,1.81e-25,18;CL:0002546,1.81e-25,18;CL:0002139,2.27e-19,24;CL:0000115,3.02e-13,36;CL:0002078,8.78e-11,45;CL:0002544,1.32e-09,6;CL:0000213,1.46e-08,58;CL:0000215,1.46e-08,58;CL:0000076,6.00e-08,63;CL:1000413,7.91e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.81e-25;18!UBERON:0009847;6.76e-18;3!UBERON:0003353;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.59e-44!18;UBERON:0004638!1.59e-44!18;UBERON:0004852!1.59e-44!18;UBERON:0000487!4.48e-36!22;UBERON:0006914!1.65e-31!25;UBERON:0003915!3.54e-19!9;UBERON:0004700!3.54e-19!9;UBERON:0001917!3.54e-19!9;UBERON:0001638!4.11e-19!9;UBERON:0003920!4.11e-19!9;UBERON:0004582!4.11e-19!9;UBERON:0005800!4.26e-15!2;UBERON:0001515!4.26e-15!2;UBERON:0002066!6.54e-13!5;UBERON:0002049!3.80e-12!79;UBERON:0007798!3.80e-12!79;UBERON:0001981!5.89e-12!60;UBERON:0007500!5.89e-12!60;UBERON:0004537!5.89e-12!60;UBERON:0006965!5.89e-12!60;UBERON:0000055!3.90e-10!69;UBERON:0004535!5.01e-08!110;UBERON:0004872!5.68e-08!84;UBERON:0002506!7.59e-08!1;UBERON:0001769!7.59e-08!1;UBERON:0001009!9.50e-08!113;UBERON:0000488!1.87e-07!4;UBERON:0003914!2.37e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0005800;7.14e-26;2!UBERON:0001515;7.14e-26;2!UBERON:0004638;1.81e-25;18!UBERON:0001986;1.81e-25;18!UBERON:0004852;1.81e-25;18!UBERON:0001638;6.41e-23;9!UBERON:0003920;6.41e-23;9!UBERON:0004582;6.41e-23;9!UBERON:0000487;4.90e-21;22!UBERON:0006914;1.23e-18;25!UBERON:0000490;4.34e-14;33!UBERON:0003914;2.55e-07;74!UBERON:0003915;8.37e-07;9!UBERON:0004700;8.37e-07;9!UBERON:0001917;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,5.56e-26,2;UBERON:0001515,5.56e-26,2;UBERON:0004638,1.81e-25,18;UBERON:0001986,1.81e-25,18;UBERON:0004852,1.81e-25,18;UBERON:0001638,7.17e-23,9;UBERON:0003920,7.17e-23,9;UBERON:0004582,7.17e-23,9;UBERON:0000487,4.90e-21,22;UBERON:0006914,1.23e-18,25;UBERON:0007500,1.98e-08,59;UBERON:0001981,1.98e-08,59;UBERON:0004537,1.98e-08,59;UBERON:0006965,1.98e-08,59;UBERON:0000055,2.01e-07,68;UBERON:0003915,7.91e-07,9;UBERON:0004700,7.91e-07,9;UBERON:0001917,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0.838998872419812,0,0.417989933073621,0,0,0,0,0.760272105718513,0,0.735326160691737,1.62028389576352,0.714397826272638,0.673588117878509,0.225222960966644,1.53316637465883,0,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6912059859821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MSMP | |||
}} |
Latest revision as of 08:52, 17 September 2015
Short description: | p4@MSMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSMP_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | -76bp_to_NM_001044264_5end |
EntrezGene: | MSMP |
HGNC: | 29663 |
UniProt: | Q1L6U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.17e-33 | 6 |
thoracic aorta endothelial cell | 5.56e-26 | 2 |
blood vessel endothelial cell | 1.81e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.81e-25 | 18 |
endothelial cell of vascular tree | 2.27e-19 | 24 |
endothelial cell | 3.02e-13 | 36 |
meso-epithelial cell | 8.78e-11 | 45 |
aortic endothelial cell | 1.32e-09 | 6 |
lining cell | 1.46e-08 | 58 |
barrier cell | 1.46e-08 | 58 |
squamous epithelial cell | 6.00e-08 | 63 |
endothelial cell of artery | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 5.56e-26 | 2 |
thoracic aorta | 5.56e-26 | 2 |
blood vessel endothelium | 1.81e-25 | 18 |
endothelium | 1.81e-25 | 18 |
cardiovascular system endothelium | 1.81e-25 | 18 |
vein | 7.17e-23 | 9 |
venous blood vessel | 7.17e-23 | 9 |
venous system | 7.17e-23 | 9 |
simple squamous epithelium | 4.90e-21 | 22 |
squamous epithelium | 1.23e-18 | 25 |
epithelial tube open at both ends | 1.98e-08 | 59 |
blood vessel | 1.98e-08 | 59 |
blood vasculature | 1.98e-08 | 59 |
vascular cord | 1.98e-08 | 59 |
vessel | 2.01e-07 | 68 |
endothelial tube | 7.91e-07 | 9 |
arterial system endothelium | 7.91e-07 | 9 |
endothelium of artery | 7.91e-07 | 9 |