FFCP PHASE1:Hg19::chr9:35756690..35756739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29663 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-80bp_to_ENST00000414286_5end | |||
|cluster_id=chr9:35756690..35756739,- | |||
|description=CAGE_peak_2_at_MSMP_5end | |||
|id=chr9:35756690..35756739,- | |||
|ontology_enrichment_celltype=CL:0000945!4.55e-18!24;CL:0000826!4.55e-18!24;CL:0000071!6.37e-18!18;CL:0002546!6.37e-18!18;CL:0002139!6.70e-17!24;CL:0000115!2.68e-16!35;CL:0002078!9.85e-16!44;CL:0000213!2.03e-12!57;CL:0000215!2.03e-12!57;CL:0000542!5.09e-10!53;CL:0000051!5.09e-10!53;CL:0000236!1.65e-09!14;CL:0000838!2.76e-09!52;CL:1000413!7.87e-09!9;CL:0002543!5.01e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.14e-40;18!CL:0002139;1.12e-34;24!CL:0000115;6.00e-27;36!CL:1000413;1.10e-24;9!CL:0000945;2.05e-22;24!CL:0002543;5.64e-19;6!CL:0000236;1.24e-17;13!CL:0002078;1.11e-15;45!CL:0002618;2.18e-14;3!CL:0002544;5.83e-13;6!CL:0000213;3.46e-12;58!CL:0000215;3.46e-12;58!CL:0002188;7.90e-09;5!CL:0000542;1.54e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,5.85e-41,18;CL:0002546,5.85e-41,18;CL:0002139,9.42e-35,24;CL:0000115,4.32e-33,36;CL:0002078,1.07e-25,45;CL:1000413,1.13e-24,9;CL:0000945,2.38e-22,24;CL:0000826,2.38e-22,24;CL:0002543,3.26e-19,6;CL:0000213,4.51e-19,58;CL:0000215,4.51e-19,58;CL:0000236,2.64e-16,14;CL:0002618,2.71e-14,3;CL:0002544,1.06e-12,6;CL:0000542,9.34e-11,53;CL:0000051,9.34e-11,53;CL:0000076,9.66e-10,63;CL:0000838,4.07e-09,52;CL:0002188,1.00e-08,5;CL:0000222,2.64e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.14e-40;18!CL:0000051;1.54e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.33e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.77e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001986!6.37e-18!18;UBERON:0004638!6.37e-18!18;UBERON:0004852!6.37e-18!18;UBERON:0000487!6.84e-17!22;UBERON:0006914!1.11e-15!25;UBERON:0003915!7.87e-09!9;UBERON:0004700!7.87e-09!9;UBERON:0001917!7.87e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.14e-40;18!UBERON:0001986;1.14e-40;18!UBERON:0004852;1.14e-40;18!UBERON:0000487;9.03e-33;22!UBERON:0006914;1.67e-28;25!UBERON:0003915;1.10e-24;9!UBERON:0004700;1.10e-24;9!UBERON:0001917;1.10e-24;9!UBERON:0000490;3.51e-19;33!UBERON:0001638;1.39e-12;9!UBERON:0003920;1.39e-12;9!UBERON:0004582;1.39e-12;9!UBERON:0002066;7.90e-09;5!UBERON:0007500;1.47e-08;56!UBERON:0001981;1.47e-08;56!UBERON:0004537;1.47e-08;56!UBERON:0003914;6.41e-07;74!UBERON:0000055;9.34e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.85e-41,18;UBERON:0001986,5.85e-41,18;UBERON:0004852,5.85e-41,18;UBERON:0000487,5.27e-33,22;UBERON:0006914,1.04e-28,25;UBERON:0003915,1.13e-24,9;UBERON:0004700,1.13e-24,9;UBERON:0001917,1.13e-24,9;UBERON:0001638,9.69e-13,9;UBERON:0003920,9.69e-13,9;UBERON:0004582,9.69e-13,9;UBERON:0007500,1.94e-12,59;UBERON:0001981,1.94e-12,59;UBERON:0004537,1.94e-12,59;UBERON:0006965,1.94e-12,59;UBERON:0000055,5.04e-12,68;UBERON:0002049,4.50e-10,78;UBERON:0007798,4.50e-10,78;UBERON:0002066,8.97e-09,5;UBERON:0004872,5.30e-08,83;UBERON:0003914,1.18e-07,117 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.656804715599566,0.236132343941038,0,0,0,0,0,0.369754010166788,8.90872806673469,0.426507697462265,2.05520307534393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,2.66852776159066,2.13365111283254,2.00197993518006,1.14950487990897,2.64417949113945,0,2.84606484554724,0.587237189370939,0.382273228125229,2.64342657158052,0,0.526768169550154,0,0,0.205601498999509,0.501559486172034,0,0,0,0,0,0.221533894583621,0.270803863765016,0.25618263945135,0,0.328875809207352,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.189069634328136,0.665188192387692,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.953962497221368,0.571994910780128,1.11437250398869,2.58391129576717,0,1.04142150482278,1.13061588384802,1.25849830862972,1.6507082516404,1.46296476575767,0,0.35576626268671,1.00416183829401,0.402829317109147,1.52054421143703,0.488124115096339,0.735326160691737,2.43042584364528,1.25019619597712,1.57170560838319,1.0135033243499,1.53316637465883,0.949265659568129,1.64881569537367,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,1.02056223165909,0.863663664408557,1.54227252690289,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,7.80373335528019,0,0.0711418433484141,0.159426272728822,0.59873811429845,0,0.635020748171649,0,0,0,0,0,0.677167111206413,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.494411622680279,0,0,1.10513566212459,0.251932747854276,0.102268682502155,0.369254416383208,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,2.91927662745066,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,1.99396161812156,0.992975867626496,1.2557316736289,3.58417289318877,0,0,0,0,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0.273810757783986,1.27746588066972,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.202210631562555,0.0984274815147488,1.1007533168552,0,0.136203406111576,0,0.412618309791701,0.83088067605837,0,0,0.182248669974074,0,0,0,0,1.43429871466276,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0,0,0.496166021811951,0,4.14094834495046,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0.567515953566836,0,0,0,0,0.215649622793364,0.157265941855896,0.327628914576042,0.169732529954025,0,0,0,0,0.315446980005013,0,0,0,0.192687675289379,0,0,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.576169937778896,0.171488009437418,0.135939465953663,0.197318320688547,0.236387681767936,1.22354542081276,0,0.471346769748006,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,1.35866559210006,0.0771741581079447,0,3.76253837089218,0,0.235676547101626,0.196308467114945,0,0,0,0.281951753939561,0.322289439867886,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p2@MSMP | |||
}} |
Latest revision as of 08:52, 17 September 2015
Short description: | p2@MSMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSMP_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000414286_5end |
EntrezGene: | MSMP |
HGNC: | 29663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 5.85e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.85e-41 | 18 |
endothelial cell of vascular tree | 9.42e-35 | 24 |
endothelial cell | 4.32e-33 | 36 |
meso-epithelial cell | 1.07e-25 | 45 |
endothelial cell of artery | 1.13e-24 | 9 |
lymphocyte of B lineage | 2.38e-22 | 24 |
pro-B cell | 2.38e-22 | 24 |
vein endothelial cell | 3.26e-19 | 6 |
lining cell | 4.51e-19 | 58 |
barrier cell | 4.51e-19 | 58 |
B cell | 2.64e-16 | 14 |
endothelial cell of umbilical vein | 2.71e-14 | 3 |
aortic endothelial cell | 1.06e-12 | 6 |
lymphocyte | 9.34e-11 | 53 |
common lymphoid progenitor | 9.34e-11 | 53 |
squamous epithelial cell | 9.66e-10 | 63 |
lymphoid lineage restricted progenitor cell | 4.07e-09 | 52 |
glomerular endothelial cell | 1.00e-08 | 5 |
mesodermal cell | 2.64e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.85e-41 | 18 |
endothelium | 5.85e-41 | 18 |
cardiovascular system endothelium | 5.85e-41 | 18 |
simple squamous epithelium | 5.27e-33 | 22 |
squamous epithelium | 1.04e-28 | 25 |
endothelial tube | 1.13e-24 | 9 |
arterial system endothelium | 1.13e-24 | 9 |
endothelium of artery | 1.13e-24 | 9 |
vein | 9.69e-13 | 9 |
venous blood vessel | 9.69e-13 | 9 |
venous system | 9.69e-13 | 9 |
epithelial tube open at both ends | 1.94e-12 | 59 |
blood vessel | 1.94e-12 | 59 |
blood vasculature | 1.94e-12 | 59 |
vascular cord | 1.94e-12 | 59 |
vessel | 5.04e-12 | 68 |
vasculature | 4.50e-10 | 78 |
vascular system | 4.50e-10 | 78 |
umbilical vein | 8.97e-09 | 5 |
splanchnic layer of lateral plate mesoderm | 5.30e-08 | 83 |
epithelial tube | 1.18e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.77e-08 | 10 |