FFCP PHASE1:Hg19::chr1:154300217..154300251,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154300217..154300251,+ to FFCP PHASE1:Hg19::chr1:154300217..154300251,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57198 | |EntrezGene=57198 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13534 | |HGNC=13534 | ||
|TSSclassifier=strong | |||
|UniProt=P98198,Q6P3T1 | |UniProt=P98198,Q6P3T1 | ||
|association_with_transcript=-24bp_to_ENST00000368489,NM_020452,uc001fex.2_5end | |||
|cluster_id=chr1:154300217..154300251,+ | |||
|description=CAGE_peak_3_at_ATP8B2_5end | |||
|id=chr1:154300217..154300251,+ | |||
|ontology_enrichment_celltype=CL:0000542!9.29e-23!53;CL:0000051!9.29e-23!53;CL:0000838!6.60e-22!52;CL:0000791!2.03e-16!18;CL:0000789!2.03e-16!18;CL:0002420!2.03e-16!18;CL:0002419!2.03e-16!18;CL:0000790!2.03e-16!18;CL:0000084!3.74e-15!25;CL:0000827!3.74e-15!25;CL:0000625!1.14e-10!11;CL:0002087!1.95e-09!119;CL:0000624!7.89e-09!6;CL:0000236!9.69e-09!14;CL:0000738!1.33e-08!140;CL:0000037!2.23e-08!172;CL:0000566!2.23e-08!172;CL:0000988!4.43e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.98e-30;18!CL:0000789;1.98e-30;18!CL:0002419;1.98e-30;18!CL:0000084;1.50e-27;25!CL:0000542;2.23e-20;53!CL:0000624;4.47e-19;6!CL:0000625;3.67e-16;11!CL:0000236;2.59e-12;13!CL:0000898;2.96e-10;3!CL:0000226;1.06e-09;3!CL:0000842;1.06e-09;3!CL:0000623;6.22e-09;3!CL:0000123;9.15e-08;2!CL:0000242;9.15e-08;2!CL:0000815;1.77e-07;2!CL:0000792;1.77e-07;2!CL:0002677;1.77e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.73e-36,53;CL:0000051,7.73e-36,53;CL:0000838,5.16e-34,52;CL:0000791,2.37e-30,18;CL:0000789,2.37e-30,18;CL:0002420,2.37e-30,18;CL:0002419,2.37e-30,18;CL:0000790,2.37e-30,18;CL:0000084,2.09e-27,25;CL:0000827,2.09e-27,25;CL:0000624,4.42e-19,6;CL:0002087,2.52e-17,115;CL:0000625,4.35e-16,11;CL:0000738,1.44e-15,136;CL:0000037,5.80e-12,168;CL:0002031,1.38e-11,120;CL:0000236,2.20e-11,14;CL:0000988,6.25e-11,177;CL:0000898,2.83e-10,3;CL:0000226,1.10e-09,3;CL:0000842,1.10e-09,3;CL:0000623,3.96e-09,3;CL:0000825,3.96e-09,3;CL:0002032,1.91e-08,161;CL:0000837,1.91e-08,161;CL:0000242,9.17e-08,2;CL:0000815,1.89e-07,2;CL:0000792,1.89e-07,2;CL:0002677,1.89e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.98e-30;18!CL:0000051;2.23e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.49e-09!15;UBERON:0000179!7.49e-09!15;UBERON:0000463!7.49e-09!15;UBERON:0007023!1.01e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-21;15!UBERON:0000179;1.94e-21;15!UBERON:0000463;1.94e-21;15!UBERON:0002390;3.46e-10;32!UBERON:0002193;3.79e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.10e-21,15;UBERON:0000179,2.10e-21,15;UBERON:0000463,2.10e-21,15 | |||
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| ||
|short_description=p3@ATP8B2 | |||
}} | }} |
Latest revision as of 08:54, 17 September 2015
Short description: | p3@ATP8B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATP8B2_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000368489, NM_020452, uc001fex.2_5end |
EntrezGene: | ATP8B2 |
HGNC: | 13534 |
UniProt: | P98198Q6P3T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.73e-36 | 53 |
common lymphoid progenitor | 7.73e-36 | 53 |
lymphoid lineage restricted progenitor cell | 5.16e-34 | 52 |
mature alpha-beta T cell | 2.37e-30 | 18 |
alpha-beta T cell | 2.37e-30 | 18 |
immature T cell | 2.37e-30 | 18 |
mature T cell | 2.37e-30 | 18 |
immature alpha-beta T cell | 2.37e-30 | 18 |
T cell | 2.09e-27 | 25 |
pro-T cell | 2.09e-27 | 25 |
CD4-positive, alpha-beta T cell | 4.42e-19 | 6 |
nongranular leukocyte | 2.52e-17 | 115 |
CD8-positive, alpha-beta T cell | 4.35e-16 | 11 |
leukocyte | 1.44e-15 | 136 |
hematopoietic stem cell | 5.80e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 1.38e-11 | 120 |
B cell | 2.20e-11 | 14 |
hematopoietic cell | 6.25e-11 | 177 |
naive T cell | 2.83e-10 | 3 |
single nucleate cell | 1.10e-09 | 3 |
mononuclear cell | 1.10e-09 | 3 |
natural killer cell | 3.96e-09 | 3 |
pro-NK cell | 3.96e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-08 | 161 |
Merkel cell | 9.17e-08 | 2 |
regulatory T cell | 1.89e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.89e-07 | 2 |
naive regulatory T cell | 1.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.10e-21 | 15 |
haemolymphatic fluid | 2.10e-21 | 15 |
organism substance | 2.10e-21 | 15 |