FFCP PHASE1:Hg19::chr15:38852788..38852816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10125 | |EntrezGene=10125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9878 | |HGNC=9878 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-308bp_to_ENST00000558418_5end | |association_with_transcript=-308bp_to_ENST00000558418_5end | ||
|cluster_id=chr15:38852788..38852816,- | |||
|description=CAGE_peak_4_at_RASGRP1_5end | |description=CAGE_peak_4_at_RASGRP1_5end | ||
|id=chr15:38852788..38852816,- | |id=chr15:38852788..38852816,- | ||
|ontology_enrichment_celltype=CL:0000838!9.16e-38!52;CL:0000542!6.07e-37!53;CL:0000051!6.07e-37!53;CL:0000791!1.67e-31!18;CL:0000789!1.67e-31!18;CL:0002420!1.67e-31!18;CL:0002419!1.67e-31!18;CL:0000790!1.67e-31!18;CL:0000084!5.91e-30!25;CL:0000827!5.91e-30!25;CL:0000624!7.69e-26!6;CL:0002087!2.00e-24!119;CL:0002031!8.69e-20!124;CL:0000738!1.01e-19!140;CL:0000988!6.09e-16!182;CL:0000037!9.18e-15!172;CL:0000566!9.18e-15!172;CL:0000898!1.46e-13!3;CL:0000623!1.96e-13!3;CL:0000825!1.96e-13!3;CL:0002032!2.96e-13!165;CL:0000837!2.96e-13!165;CL:0000625!4.76e-13!11;CL:0000080!1.28e-10!6;CL:0000815!8.39e-10!2;CL:0000792!8.39e-10!2;CL:0002677!8.39e-10!2 | |ontology_enrichment_celltype=CL:0000838!9.16e-38!52;CL:0000542!6.07e-37!53;CL:0000051!6.07e-37!53;CL:0000791!1.67e-31!18;CL:0000789!1.67e-31!18;CL:0002420!1.67e-31!18;CL:0002419!1.67e-31!18;CL:0000790!1.67e-31!18;CL:0000084!5.91e-30!25;CL:0000827!5.91e-30!25;CL:0000624!7.69e-26!6;CL:0002087!2.00e-24!119;CL:0002031!8.69e-20!124;CL:0000738!1.01e-19!140;CL:0000988!6.09e-16!182;CL:0000037!9.18e-15!172;CL:0000566!9.18e-15!172;CL:0000898!1.46e-13!3;CL:0000623!1.96e-13!3;CL:0000825!1.96e-13!3;CL:0002032!2.96e-13!165;CL:0000837!2.96e-13!165;CL:0000625!4.76e-13!11;CL:0000080!1.28e-10!6;CL:0000815!8.39e-10!2;CL:0000792!8.39e-10!2;CL:0002677!8.39e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.92e-40;6!CL:0000084;3.67e-15;25!CL:0000791;9.09e-14;18!CL:0000789;9.09e-14;18!CL:0002419;9.09e-14;18!CL:0000542;1.29e-13;53!CL:0000945;1.36e-10;24!CL:0000815;6.67e-09;2!CL:0000792;6.67e-09;2!CL:0002677;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.28e-40,6;CL:0000838,2.40e-28,52;CL:0000542,8.51e-28,53;CL:0000051,8.51e-28,53;CL:0000084,3.51e-15,25;CL:0000827,3.51e-15,25;CL:0000791,7.95e-14,18;CL:0000789,7.95e-14,18;CL:0002420,7.95e-14,18;CL:0002419,7.95e-14,18;CL:0000790,7.95e-14,18;CL:0002087,3.13e-12,115;CL:0002031,1.10e-11,120;CL:0000945,1.28e-10,24;CL:0000826,1.28e-10,24;CL:0000738,3.31e-10,136;CL:0000815,5.49e-09,2;CL:0000792,5.49e-09,2;CL:0002677,5.49e-09,2;CL:0002032,1.78e-08,161;CL:0000837,1.78e-08,161;CL:0000037,4.42e-08,168;CL:0000988,1.28e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;9.09e-14;18!CL:0000051;1.29e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.78e-16;1!DOID:0050177;1.78e-16;1!DOID:0060060;1.78e-16;1!DOID:0060061;1.78e-16;1!DOID:0050427;1.78e-16;1!DOID:8691;1.78e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.04e-16,1;DOID:0050177,1.04e-16,1;DOID:0050427,1.04e-16,1;DOID:0060060,2.63e-16,1;DOID:0060061,2.63e-16,1;DOID:8691,2.63e-16,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@RASGRP1 | |short_description=p4@RASGRP1 | ||
}} | }} |
Latest revision as of 08:59, 17 September 2015
Short description: | p4@RASGRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASGRP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -308bp_to_ENST00000558418_5end |
EntrezGene: | RASGRP1 |
HGNC: | 9878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.28e-40 | 6 |
lymphoid lineage restricted progenitor cell | 2.40e-28 | 52 |
lymphocyte | 8.51e-28 | 53 |
common lymphoid progenitor | 8.51e-28 | 53 |
T cell | 3.51e-15 | 25 |
pro-T cell | 3.51e-15 | 25 |
mature alpha-beta T cell | 7.95e-14 | 18 |
alpha-beta T cell | 7.95e-14 | 18 |
immature T cell | 7.95e-14 | 18 |
mature T cell | 7.95e-14 | 18 |
immature alpha-beta T cell | 7.95e-14 | 18 |
nongranular leukocyte | 3.13e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-11 | 120 |
lymphocyte of B lineage | 1.28e-10 | 24 |
pro-B cell | 1.28e-10 | 24 |
leukocyte | 3.31e-10 | 136 |
regulatory T cell | 5.49e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.49e-09 | 2 |
naive regulatory T cell | 5.49e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-08 | 161 |
hematopoietic stem cell | 4.42e-08 | 168 |
hematopoietic cell | 1.28e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.04e-16 | 1 |
monogenic disease | 1.04e-16 | 1 |
xeroderma pigmentosum | 1.04e-16 | 1 |
non-Hodgkin lymphoma | 2.63e-16 | 1 |
cutaneous T cell lymphoma | 2.63e-16 | 1 |
mycosis fungoides | 2.63e-16 | 1 |