FFCP PHASE1:Hg19::chr8:21669826..21669866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2675 | |EntrezGene=2675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4244 | |HGNC=4244 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000517328_5end | |||
|cluster_id=chr8:21669826..21669866,- | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_6_at_GFRA2_5end | |||
|id=chr8:21669826..21669866,- | |||
|ontology_enrichment_celltype=CL:0000540!6.25e-10!6;CL:0000031!6.25e-10!6;CL:0000404!6.25e-10!6;CL:0000047!1.48e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.33e-32;5!CL:0002321;1.24e-11;15!CL:0000540;6.55e-08;6!CL:0000404;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.34e-08,6;CL:0000031,6.34e-08,6;CL:0000404,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.10e-09;5!CL:0000031;6.55e-08;6 | |||
|ontology_enrichment_disease=DOID:171!2.64e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:169;2.22e-27;6!DOID:171;6.65e-17;10!DOID:3095;2.98e-08;22!DOID:2994;2.98e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.82e-27,6;DOID:171,5.90e-17,10;DOID:3095,2.82e-08,22;DOID:2994,2.82e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0002298!7.10e-27!8;UBERON:0001896!1.00e-18!3;UBERON:0005290!1.00e-18!3;UBERON:0010096!1.00e-18!3;UBERON:0004733!1.04e-17!12;UBERON:0002028!1.04e-17!12;UBERON:0007277!1.04e-17!12;UBERON:0004732!2.62e-16!13;UBERON:0000073!1.24e-14!94;UBERON:0001016!1.24e-14!94;UBERON:0003076!4.57e-14!15;UBERON:0003057!4.57e-14!15;UBERON:0005743!2.14e-12!86;UBERON:0001017!3.01e-11!82;UBERON:0001049!1.82e-10!57;UBERON:0005068!1.82e-10!57;UBERON:0006241!1.82e-10!57;UBERON:0007135!1.82e-10!57;UBERON:0002346!3.71e-10!90;UBERON:0002616!4.73e-10!59;UBERON:0000988!2.87e-09!3;UBERON:0006331!3.52e-09!3;UBERON:0007023!9.04e-09!115;UBERON:0000924!1.44e-08!173;UBERON:0006601!1.44e-08!173;UBERON:0000955!3.42e-08!69;UBERON:0006238!3.42e-08!69;UBERON:0003075!1.12e-07!86;UBERON:0007284!1.12e-07!86;UBERON:0001301!2.21e-07!1;UBERON:0002038!2.66e-07!1;UBERON:0009661!2.66e-07!1;UBERON:0002336!3.01e-07!1;UBERON:0001018!3.01e-07!1;UBERON:0002473!3.01e-07!1;UBERON:0005340!3.01e-07!1;UBERON:0002316!3.01e-07!1;UBERON:0003544!3.01e-07!1;UBERON:0001020!3.01e-07!1;UBERON:0005970!3.01e-07!1;UBERON:0002437!3.01e-07!1;UBERON:0006834!3.62e-07!1;UBERON:0002902!4.61e-07!1;UBERON:0009899!4.61e-07!1;UBERON:0004121!9.35e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.33e-32;5!UBERON:0002410;1.33e-32;5!UBERON:0000341;5.15e-21;2!UBERON:0000010;1.18e-18;8!UBERON:0002046;3.10e-09;5!UBERON:0000974;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.05e-32,5;UBERON:0002410,1.05e-32,5;UBERON:0000341,6.96e-21,2;UBERON:0000010,1.03e-18,8;UBERON:0002046,3.22e-09,5;UBERON:0004117,3.22e-09,5;UBERON:0007689,3.22e-09,5;UBERON:0007123,3.22e-09,5;UBERON:0003091,3.22e-09,5 | |||
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|short_description=p6@GFRA2 | |||
}} | }} |
Latest revision as of 09:18, 17 September 2015
Short description: | p6@GFRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GFRA2_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 2bp_to_ENST00000517328_5end |
EntrezGene: | GFRA2 |
HGNC: | 4244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.34e-08 | 6 |
neuroblast | 6.34e-08 | 6 |
electrically signaling cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.05e-32 | 5 |
autonomic nervous system | 1.05e-32 | 5 |
throat | 6.96e-21 | 2 |
peripheral nervous system | 1.03e-18 | 8 |
thyroid gland | 3.22e-09 | 5 |
pharyngeal pouch | 3.22e-09 | 5 |
thyroid diverticulum | 3.22e-09 | 5 |
pharyngeal pouch 2 | 3.22e-09 | 5 |
thyroid primordium | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.82e-27 | 6 |
neuroectodermal tumor | 5.90e-17 | 10 |
germ cell and embryonal cancer | 2.82e-08 | 22 |
germ cell cancer | 2.82e-08 | 22 |