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FFCP PHASE1:Hg19::chr19:35521699..35521714,+: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6324
|EntrezGene=6324
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=10586
|HGNC=10586
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=Q07699
|UniProt=Q07699
|association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end
|association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end
|cluster_id=chr19:35521699..35521714,+
|coexpression_cluster_id=C9
|coexpression_cluster_id=C9
|description=CAGE_peak_4_at_SCN1B_5end
|description=CAGE_peak_4_at_SCN1B_5end

Latest revision as of 09:31, 17 September 2015

Short description:p4@SCN1B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_SCN1B_5end
Coexpression cluster:C9_skeletal_diaphragm_tongue_throat_penis_heart_left
Association with transcript: 107bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end
EntrezGene:SCN1B
HGNC: 10586
UniProt: Q07699
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data