FFCP PHASE1:Hg19::chr19:35521699..35521714,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |association_with_transcript=107bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | ||
|cluster_id=chr19:35521699..35521714,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_4_at_SCN1B_5end | |description=CAGE_peak_4_at_SCN1B_5end |
Latest revision as of 09:31, 17 September 2015
Short description: | p4@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN1B_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 107bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@SCN1B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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adult organism | 8.73e-42 | 114 |
neural tube | 1.08e-24 | 56 |
neural rod | 1.08e-24 | 56 |
future spinal cord | 1.08e-24 | 56 |
neural keel | 1.08e-24 | 56 |
regional part of nervous system | 2.82e-22 | 53 |
regional part of brain | 2.82e-22 | 53 |
structure with developmental contribution from neural crest | 9.04e-21 | 132 |
central nervous system | 2.07e-20 | 81 |
neural plate | 5.47e-19 | 82 |
Showing 1 to 10 of 54 entries