FFCP PHASE1:Hg19::chr11:22688344..22688355,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |||
|TSSclassifier=strong | |||
|UniProt=O43903 | |||
|association_with_transcript=183bp_to_ENST00000454584_5end | |||
|cluster_id=chr11:22688344..22688355,+ | |||
|description=CAGE_peak_19_at_GAS2_5end | |||
|id=chr11:22688344..22688355,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.44e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.12e-19,24;CL:0000826,2.12e-19,24;CL:0000838,3.09e-09,52;CL:0000542,4.53e-09,53;CL:0000051,4.53e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.47e-32!57;UBERON:0005068!9.47e-32!57;UBERON:0006241!9.47e-32!57;UBERON:0007135!9.47e-32!57;UBERON:0007023!2.98e-27!115;UBERON:0001017!1.57e-26!82;UBERON:0002616!1.10e-25!59;UBERON:0003075!3.73e-25!86;UBERON:0007284!3.73e-25!86;UBERON:0005743!6.53e-25!86;UBERON:0000955!1.75e-24!69;UBERON:0006238!1.75e-24!69;UBERON:0002346!1.19e-23!90;UBERON:0000073!2.42e-23!94;UBERON:0001016!2.42e-23!94;UBERON:0002780!2.01e-22!41;UBERON:0001890!2.01e-22!41;UBERON:0006240!2.01e-22!41;UBERON:0003080!9.05e-22!42;UBERON:0000153!7.15e-16!129;UBERON:0007811!7.15e-16!129;UBERON:0002020!1.81e-15!34;UBERON:0003528!1.81e-15!34;UBERON:0001893!4.04e-15!34;UBERON:0003056!6.32e-15!61;UBERON:0004121!1.15e-14!169;UBERON:0000924!4.22e-14!173;UBERON:0006601!4.22e-14!173;UBERON:0002791!9.82e-14!33;UBERON:0000033!1.45e-13!123;UBERON:0002298!7.96e-13!8;UBERON:0001869!5.01e-12!32;UBERON:0003076!3.58e-11!15;UBERON:0003057!3.58e-11!15;UBERON:0000025!5.31e-11!194;UBERON:0001950!1.50e-10!20;UBERON:0002308!2.21e-10!9;UBERON:0000125!2.21e-10!9;UBERON:0001894!4.57e-10!7;UBERON:0006222!4.57e-10!7;UBERON:0000483!5.99e-10!309;UBERON:0000119!9.70e-10!312;UBERON:0004111!1.54e-09!241;UBERON:0006331!1.57e-09!3;UBERON:0000988!1.62e-09!3;UBERON:0002619!1.86e-09!22;UBERON:0000477!3.20e-08!286;UBERON:0004733!3.60e-08!12;UBERON:0002028!3.60e-08!12;UBERON:0007277!3.60e-08!12;UBERON:0000956!3.86e-08!25;UBERON:0000203!3.86e-08!25;UBERON:0000475!9.12e-08!365;UBERON:0004732!1.77e-07!13;UBERON:0003296!3.05e-07!4;UBERON:0010133!3.05e-07!4;UBERON:0001905!6.28e-07!2;UBERON:0002757!6.28e-07!2;UBERON:0010134!6.28e-07!2;UBERON:0002784!6.28e-07!2;UBERON:0005408!6.28e-07!2;UBERON:0001899!6.28e-07!2;UBERON:0002148!7.46e-07!2;UBERON:0009662!7.46e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.78e-15;2!UBERON:0001905;1.78e-15;2!UBERON:0002757;1.78e-15;2!UBERON:0010134;1.78e-15;2!UBERON:0005408;1.78e-15;2!UBERON:0001899;1.78e-15;2!UBERON:0003296;2.11e-08;4!UBERON:0010133;2.11e-08;4!UBERON:0002784;2.11e-08;4!UBERON:0002021;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.05e-15,2;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4;UBERON:0002021,5.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,1.31360943119913,1.41679406364623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,1.47701766553283,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0.393915911536118,0.494495150286999,0.26961417541674,0,0.423366660328922,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.665574309221114,0.372578417648301,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.826747186004736,0.126831620387814,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0.543757863814654,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0,0,0,0,0.235676547101626,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0.452122368852043,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@GAS2 | |||
}} |
Latest revision as of 09:34, 17 September 2015
Short description: | p19@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_GAS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 183bp_to_ENST00000454584_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.12e-19 | 24 |
pro-B cell | 2.12e-19 | 24 |
lymphoid lineage restricted progenitor cell | 3.09e-09 | 52 |
lymphocyte | 4.53e-09 | 53 |
common lymphoid progenitor | 4.53e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.05e-15 | 2 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
occipital lobe | 5.38e-07 | 5 |