Personal tools

FFCP PHASE1:Hg19::chr8:21911117..21911122,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=2039|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3382|TSSclassifier=S|UniProt=E5RJ61,Q08495|association_with_transcript=36bp_to_ENST00000381470,ENST00000519850,NM_001114137,uc010ltl.2_5end|coexpression_cluster_id=C51|description=CAGE_peak_45_at_EPB49_5end|id=chr8:21911117..21911122,+|ontology_enrichment_celltype=CL:0000313!3.66e-15!1;CL:0000181!3.02e-11!12;CL:0000417!3.02e-11!12;CL:0000668!3.02e-11!12;CL:0000414!3.02e-11!12;CL:0000412!3.02e-11!12;CL:0000182!3.02e-11!12;CL:0002535!1.86e-08!2;CL:0000159!3.08e-08!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003104;1.90e-14;31!UBERON:0003918;2.87e-11;10!UBERON:0007687;2.87e-11;10!UBERON:0004161;2.27e-10;11!UBERON:0009497;5.49e-09;13|ontology_enrichment_disease=DOID:2152!3.66e-15!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!6.69e-16!55;UBERON:0005173!6.69e-16!55;UBERON:0001301!2.75e-15!1;UBERON:0004911!3.66e-15!1;UBERON:0002417!2.85e-14!61;UBERON:0000916!2.85e-14!61;UBERON:0002107!2.60e-12!19;UBERON:0006925!2.60e-12!19;UBERON:0008836!2.60e-12!19;UBERON:0008835!1.14e-10!22;UBERON:0003894!1.14e-10!22;UBERON:0009854!3.23e-10!23;UBERON:0007499!2.03e-09!25;UBERON:0009497!2.03e-09!25;UBERON:0000015!2.03e-09!25;UBERON:0002423!2.03e-09!25;UBERON:0006235!2.03e-09!25;UBERON:0004161!2.03e-09!25;UBERON:0005057!4.57e-09!26;UBERON:0009856!4.57e-09!26;UBERON:0002113!9.31e-09!27;UBERON:0003918!9.31e-09!27;UBERON:0005095!9.31e-09!27;UBERON:0007687!9.31e-09!27;UBERON:0006955!1.86e-08!2;UBERON:0004801!1.86e-08!2;UBERON:0004909!3.08e-08!2;UBERON:0005177!8.07e-08!107;UBERON:0002365!1.22e-07!31;UBERON:0002330!1.22e-07!31;UBERON:0000489!2.02e-07!32;UBERON:0009569!2.31e-07!113;UBERON:0002368!8.66e-07!35|ontology_enrichment_uberon_v019=UBERON:0005172;3.55e-08;52!UBERON:0005173;3.55e-08;52|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,1.97014268247995,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p45@EPB49}}
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2039
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3382
|TSSclassifier=strong
|UniProt=E5RJ61,Q08495
|association_with_transcript=36bp_to_ENST00000381470,ENST00000519850,NM_001114137,uc010ltl.2_5end
|cluster_id=chr8:21911117..21911122,+
|coexpression_cluster_id=C51
|description=CAGE_peak_45_at_EPB49_5end
|id=chr8:21911117..21911122,+
|ontology_enrichment_celltype=CL:0000313!3.66e-15!1;CL:0000181!3.02e-11!12;CL:0000417!3.02e-11!12;CL:0000668!3.02e-11!12;CL:0000414!3.02e-11!12;CL:0000412!3.02e-11!12;CL:0000182!3.02e-11!12;CL:0002535!1.86e-08!2;CL:0000159!3.08e-08!2
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0003104;1.90e-14;31!UBERON:0003918;2.87e-11;10!UBERON:0007687;2.87e-11;10!UBERON:0004161;2.27e-10;11!UBERON:0009497;5.49e-09;13
|ontology_enrichment_disease=DOID:2152!3.66e-15!1
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005172!6.69e-16!55;UBERON:0005173!6.69e-16!55;UBERON:0001301!2.75e-15!1;UBERON:0004911!3.66e-15!1;UBERON:0002417!2.85e-14!61;UBERON:0000916!2.85e-14!61;UBERON:0002107!2.60e-12!19;UBERON:0006925!2.60e-12!19;UBERON:0008836!2.60e-12!19;UBERON:0008835!1.14e-10!22;UBERON:0003894!1.14e-10!22;UBERON:0009854!3.23e-10!23;UBERON:0007499!2.03e-09!25;UBERON:0009497!2.03e-09!25;UBERON:0000015!2.03e-09!25;UBERON:0002423!2.03e-09!25;UBERON:0006235!2.03e-09!25;UBERON:0004161!2.03e-09!25;UBERON:0005057!4.57e-09!26;UBERON:0009856!4.57e-09!26;UBERON:0002113!9.31e-09!27;UBERON:0003918!9.31e-09!27;UBERON:0005095!9.31e-09!27;UBERON:0007687!9.31e-09!27;UBERON:0006955!1.86e-08!2;UBERON:0004801!1.86e-08!2;UBERON:0004909!3.08e-08!2;UBERON:0005177!8.07e-08!107;UBERON:0002365!1.22e-07!31;UBERON:0002330!1.22e-07!31;UBERON:0000489!2.02e-07!32;UBERON:0009569!2.31e-07!113;UBERON:0002368!8.66e-07!35
|ontology_enrichment_uberon_v019=UBERON:0005172;3.55e-08;52!UBERON:0005173;3.55e-08;52
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,1.97014268247995,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p45@EPB49
}}

Latest revision as of 09:37, 17 September 2015

Short description:p45@EPB49
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_45_at_EPB49_5end
Coexpression cluster:C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas
Association with transcript: 36bp_to_ENST00000381470, ENST00000519850, NM_001114137, uc010ltl.2_5end
EntrezGene:EPB49
HGNC: 3382
UniProt: E5RJ61Q08495
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data