FFCP PHASE1:Hg19::chr2:45169317..45169326,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:45169317..45169326,+ to FFCP PHASE1:Hg19::chr2:45169317..45169326,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6496 | |EntrezGene=6496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10889 | |HGNC=10889 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=75bp_to_AB464210,BC153026_5end | |||
|cluster_id=chr2:45169317..45169326,+ | |||
|coexpression_cluster_id=C1905 | |||
|description=CAGE_peak_13_at_SIX3_5end | |||
|id=chr2:45169317..45169326,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.34e-08!3;CL:0005012!1.34e-08!3;CL:0000067!1.34e-08!3;CL:0002304!1.34e-08!3;CL:0002586!1.51e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.14e-24;3!CL:0000067;1.14e-24;3!CL:0005012;1.14e-24;3!CL:0002304;1.14e-24;3!CL:0002586;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.14e-24,3;CL:0000067,1.14e-24,3;CL:0005012,1.14e-24,3;CL:0002304,1.14e-24,3;CL:0002586,2.79e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.57e-37;2!UBERON:0003056;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.41e-18!61;UBERON:0007625!6.44e-18!11;UBERON:0000970!7.32e-16!20;UBERON:0002104!5.90e-15!21;UBERON:0003075!1.30e-14!86;UBERON:0007284!1.30e-14!86;UBERON:0000019!3.38e-14!19;UBERON:0000047!3.38e-14!19;UBERON:0004088!3.38e-14!19;UBERON:0003072!3.38e-14!19;UBERON:0003071!3.38e-14!19;UBERON:0004128!3.38e-14!19;UBERON:0002346!1.26e-13!90;UBERON:0000020!2.21e-13!23;UBERON:0009663!2.76e-13!7;UBERON:0000966!8.61e-13!5;UBERON:0005388!8.61e-13!5;UBERON:0001802!8.61e-13!5;UBERON:0001032!1.08e-12!24;UBERON:0004456!1.08e-12!24;UBERON:0000073!1.21e-12!94;UBERON:0001016!1.21e-12!94;UBERON:0001456!1.40e-12!21;UBERON:0000033!4.97e-12!123;UBERON:0000153!6.18e-12!129;UBERON:0007811!6.18e-12!129;UBERON:0005743!2.20e-11!86;UBERON:0000369!2.90e-11!4;UBERON:0002435!2.90e-11!4;UBERON:0000204!2.90e-11!4;UBERON:0010082!2.90e-11!4;UBERON:0000488!6.72e-11!4;UBERON:0002308!4.05e-10!9;UBERON:0002420!4.05e-10!9;UBERON:0000125!4.05e-10!9;UBERON:0007245!4.05e-10!9;UBERON:0010009!4.05e-10!9;UBERON:0010011!4.05e-10!9;UBERON:0000454!4.05e-10!9;UBERON:0004121!4.38e-09!169;UBERON:0005383!5.59e-09!3;UBERON:0005382!5.59e-09!3;UBERON:0000924!1.13e-08!173;UBERON:0006601!1.13e-08!173;UBERON:0001778!1.34e-08!3;UBERON:0001775!1.34e-08!3;UBERON:0001781!1.51e-08!3;UBERON:0001782!1.51e-08!3;UBERON:0005424!1.51e-08!3;UBERON:0005085!2.28e-08!29;UBERON:0000955!3.58e-08!69;UBERON:0006238!3.58e-08!69;UBERON:0002780!4.67e-08!41;UBERON:0001890!4.67e-08!41;UBERON:0006240!4.67e-08!41;UBERON:0001017!7.49e-08!82;UBERON:0002200!8.42e-08!11;UBERON:0006876!8.42e-08!11;UBERON:0003080!8.60e-08!42;UBERON:0002616!2.21e-07!59;UBERON:0002203!3.26e-07!6;UBERON:0001768!3.26e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;4.16e-55;3!UBERON:0005382;4.16e-55;3!UBERON:0000369;1.46e-41;4!UBERON:0002435;1.46e-41;4!UBERON:0000204;1.46e-41;4!UBERON:0001873;1.57e-37;2!UBERON:0007625;2.65e-26;11!UBERON:0001778;1.14e-24;3!UBERON:0001775;1.14e-24;3!UBERON:0009663;4.14e-24;7!UBERON:0000019;1.04e-23;19!UBERON:0000047;1.04e-23;19!UBERON:0004088;1.04e-23;19!UBERON:0010230;1.04e-23;19!UBERON:0000970;1.56e-22;20!UBERON:0002104;1.80e-21;21!UBERON:0001456;1.80e-21;21!UBERON:0000020;1.27e-19;23!UBERON:0001874;1.88e-19;1!UBERON:0002420;6.40e-19;9!UBERON:0000125;6.40e-19;9!UBERON:0007245;6.40e-19;9!UBERON:0002308;6.40e-19;9!UBERON:0010009;6.40e-19;9!UBERON:0010011;6.40e-19;9!UBERON:0000454;6.40e-19;9!UBERON:0001032;8.19e-19;24!UBERON:0004456;8.19e-19;24!UBERON:0000488;8.88e-19;4!UBERON:0000966;1.88e-15;5!UBERON:0005388;1.88e-15;5!UBERON:0001802;1.88e-15;5!UBERON:0002203;7.33e-13;6!UBERON:0001768;7.33e-13;6!UBERON:0002200;7.33e-13;6!UBERON:0001801;3.58e-12;14!UBERON:0000007;2.07e-10;2!UBERON:0010371;1.66e-09;31!UBERON:0006876;1.96e-07;11!UBERON:0001781;2.97e-07;3!UBERON:0001782;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,2.88e-55,3;UBERON:0005382,2.88e-55,3;UBERON:0000369,1.11e-41,4;UBERON:0002435,1.11e-41,4;UBERON:0000204,1.11e-41,4;UBERON:0010082,1.11e-41,4;UBERON:0001873,1.30e-37,2;UBERON:0010122,1.30e-37,2;UBERON:0007625,2.49e-26,11;UBERON:0001778,1.14e-24,3;UBERON:0001775,1.14e-24,3;UBERON:0009663,3.54e-24,7;UBERON:0003056,4.71e-23,61;UBERON:0000019,1.56e-22,20;UBERON:0000047,1.56e-22,20;UBERON:0010312,1.56e-22,20;UBERON:0004088,1.56e-22,20;UBERON:0010230,1.56e-22,20;UBERON:0003072,1.56e-22,20;UBERON:0004128,1.56e-22,20;UBERON:0003071,1.56e-22,20;UBERON:0000970,1.80e-21,21;UBERON:0002104,1.80e-21,21;UBERON:0001456,1.66e-20,22;UBERON:0001874,1.56e-19,1;UBERON:0002420,5.67e-19,9;UBERON:0000125,5.67e-19,9;UBERON:0007245,5.67e-19,9;UBERON:0002308,5.67e-19,9;UBERON:0010009,5.67e-19,9;UBERON:0010011,5.67e-19,9;UBERON:0000454,5.67e-19,9;UBERON:0000020,8.19e-19,24;UBERON:0001032,8.19e-19,24;UBERON:0004456,8.19e-19,24;UBERON:0000488,8.88e-19,4;UBERON:0003075,4.23e-17,82;UBERON:0007284,4.23e-17,82;UBERON:0002346,2.73e-16,86;UBERON:0005085,1.33e-14,31;UBERON:0010371,2.10e-13,104;UBERON:0000966,4.81e-13,6;UBERON:0005388,4.81e-13,6;UBERON:0001802,4.81e-13,6;UBERON:0002203,7.33e-13,6;UBERON:0001768,7.33e-13,6;UBERON:0002200,7.33e-13,6;UBERON:0001801,3.58e-12,14;UBERON:0010314,1.87e-10,132;UBERON:0000007,2.27e-10,2;UBERON:0001444,2.87e-09,49;UBERON:0000033,4.10e-08,56;UBERON:0004121,7.86e-08,171;UBERON:0000924,7.86e-08,171;UBERON:0006601,7.86e-08,171;UBERON:0006876,1.96e-07,11;UBERON:0000153,2.49e-07,62;UBERON:0007811,2.49e-07,62;UBERON:0002780,2.75e-07,41;UBERON:0001890,2.75e-07,41;UBERON:0003080,2.75e-07,41;UBERON:0006240,2.75e-07,41;UBERON:0001782,2.79e-07,3;UBERON:0005424,2.79e-07,3 | |||
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| ||
|short_description=p13@SIX3 | |||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p13@SIX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SIX3_5end |
Coexpression cluster: | C1905_caudate_putamen_embryonic_pituitary_globus_cord_rhabdomyosarcoma |
Association with transcript: | 75bp_to_AB464210, BC153026_5end |
EntrezGene: | SIX3 |
HGNC: | 10889 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.14e-24 | 3 |
ciliated epithelial cell | 1.14e-24 | 3 |
multi-ciliated epithelial cell | 1.14e-24 | 3 |
non-pigmented ciliary epithelial cell | 1.14e-24 | 3 |
retinal pigment epithelial cell | 2.79e-07 | 3 |