FFCP PHASE2:Hg19::chr1:154581182..154581204,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:103 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:225 |TSSclassifier=strong |U...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=225 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P55265 | ||
|association_with_transcript=-458bp_to_NM_001111,NM_015840,NM_015841_5end | |association_with_transcript=-458bp_to_NM_001111,NM_015840,NM_015841_5end | ||
|cluster_id=chr1:154581182..154581204,- | |cluster_id=chr1:154581182..154581204,- | ||
Latest revision as of 09:49, 17 September 2015
| Short description: | p7@ADAR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_ADAR_5end |
| Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
| Association with transcript: | -458bp_to_NM_001111, NM_015840, NM_015841_5end |
| EntrezGene: | ADAR |
| HGNC: | 225 |
| UniProt: | P55265 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@ADAR |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 7.89e-28 | 5 |
| neuron | 3.87e-09 | 6 |
| neuroblast | 3.87e-09 | 6 |
| electrically signaling cell | 3.87e-09 | 6 |
| neuronal stem cell | 5.99e-07 | 8 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| neural nucleus | 4.37e-14 | 9 |
| nucleus of brain | 4.37e-14 | 9 |
| brainstem | 7.35e-14 | 6 |
| globus pallidus | 3.23e-11 | 2 |
| pallidum | 3.23e-11 | 2 |
| locus ceruleus | 3.98e-11 | 2 |
| brainstem nucleus | 3.98e-11 | 2 |
| hindbrain nucleus | 3.98e-11 | 2 |
| central nervous system | 6.44e-11 | 81 |
| neural tube | 1.66e-10 | 56 |
Showing 1 to 10 of 32 entries
