FFCP PHASE1:Hg19::chr10:17171785..17171816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8029 | |EntrezGene=8029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2548 | |HGNC=2548 | ||
|TSSclassifier=strong | |||
|UniProt=B0YIZ6,O60494 | |UniProt=B0YIZ6,O60494 | ||
|association_with_transcript=0bp_to_ENST00000377823,NM_001081,uc001ioo.2_5end | |association_with_transcript=0bp_to_ENST00000377823,NM_001081,uc001ioo.2_5end | ||
|cluster_id=chr10:17171785..17171816,- | |||
|coexpression_cluster_id=C148 | |coexpression_cluster_id=C148 | ||
|description=CAGE_peak_1_at_CUBN_5end | |description=CAGE_peak_1_at_CUBN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!4.49e-12!5;CL:0002563!2.32e-07!4 | |ontology_enrichment_celltype=CL:0002322!4.49e-12!5;CL:0002563!2.32e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;6.49e-15;4!CL:0002322;4.44e-12;5!CL:0002253;2.67e-08;2 | |ontology_enrichment_celltype_v019=CL:0002563;6.49e-15;4!CL:0002322;4.44e-12;5!CL:0002253;2.67e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.49e-15,4;CL:0002322,4.44e-12,5;CL:0002253,2.87e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.00e-08;2!UBERON:0003104;6.36e-08;31!UBERON:0003918;9.63e-07;10!UBERON:0007687;9.63e-07;10 | |ontology_enrichment_development_v019=UBERON:0007297;2.00e-08;2!UBERON:0003104;6.36e-08;31!UBERON:0003918;9.63e-07;10!UBERON:0007687;9.63e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!6.80e-08!1;UBERON:0000160!7.42e-08!27;UBERON:0007029!1.22e-07!1;UBERON:0001242!2.32e-07!4;UBERON:0001262!2.32e-07!4;UBERON:0004786!2.32e-07!4;UBERON:0004808!2.32e-07!4;UBERON:0001277!2.32e-07!4 | |ontology_enrichment_uberon=UBERON:0001301!6.80e-08!1;UBERON:0000160!7.42e-08!27;UBERON:0007029!1.22e-07!1;UBERON:0001242!2.32e-07!4;UBERON:0001262!2.32e-07!4;UBERON:0004786!2.32e-07!4;UBERON:0004808!2.32e-07!4;UBERON:0001277!2.32e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.54e-28;17!UBERON:0002108;2.79e-26;4!UBERON:0005409;7.13e-22;22!UBERON:0001301;1.54e-15;1!UBERON:0001242;6.49e-15;4!UBERON:0001262;6.49e-15;4!UBERON:0004786;6.49e-15;4!UBERON:0004808;6.49e-15;4!UBERON:0001277;6.49e-15;4!UBERON:0004921;7.11e-14;33!UBERON:0000485;6.31e-09;7!UBERON:0003929;6.31e-09;7!UBERON:0000922;1.40e-08;49!UBERON:0003350;6.40e-08;8!UBERON:0001155;3.34e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000160;5.54e-28;17!UBERON:0002108;2.79e-26;4!UBERON:0005409;7.13e-22;22!UBERON:0001301;1.54e-15;1!UBERON:0001242;6.49e-15;4!UBERON:0001262;6.49e-15;4!UBERON:0004786;6.49e-15;4!UBERON:0004808;6.49e-15;4!UBERON:0001277;6.49e-15;4!UBERON:0004921;7.11e-14;33!UBERON:0000485;6.31e-09;7!UBERON:0003929;6.31e-09;7!UBERON:0000922;1.40e-08;49!UBERON:0003350;6.40e-08;8!UBERON:0001155;3.34e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.54e-28,17;UBERON:0002108,2.79e-26,4;UBERON:0005409,2.48e-19,25;UBERON:0001301,1.54e-15,1;UBERON:0001242,6.49e-15,4;UBERON:0001262,6.49e-15,4;UBERON:0004786,6.49e-15,4;UBERON:0004808,6.49e-15,4;UBERON:0001277,6.49e-15,4;UBERON:0003350,6.40e-08,8;UBERON:0001155,3.45e-07,9;UBERON:0000485,3.90e-07,9 | |||
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|short_description=p1@CUBN | |short_description=p1@CUBN | ||
}} | }} |
Latest revision as of 09:52, 17 September 2015
Short description: | p1@CUBN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CUBN_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000377823, NM_001081, uc001ioo.2_5end |
EntrezGene: | CUBN |
HGNC: | 2548 |
UniProt: | B0YIZ6O60494 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.49e-15 | 4 |
embryonic stem cell | 4.44e-12 | 5 |
epithelial cell of large intestine | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.54e-28 | 17 |
small intestine | 2.79e-26 | 4 |
gastrointestinal system | 2.48e-19 | 25 |
epididymis | 1.54e-15 | 1 |
intestinal mucosa | 6.49e-15 | 4 |
wall of intestine | 6.49e-15 | 4 |
gastrointestinal system mucosa | 6.49e-15 | 4 |
gastrointestinal system epithelium | 6.49e-15 | 4 |
intestinal epithelium | 6.49e-15 | 4 |
epithelium of mucosa | 6.40e-08 | 8 |
colon | 3.45e-07 | 9 |
simple columnar epithelium | 3.90e-07 | 9 |