FFCP PHASE1:Hg19::chr8:21990835..21990846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55806 | |EntrezGene=55806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5172 | |HGNC=5172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=50bp_to_ENST00000518377_5end | |association_with_transcript=50bp_to_ENST00000518377_5end | ||
|cluster_id=chr8:21990835..21990846,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_7_at_HR_5end | |description=CAGE_peak_7_at_HR_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000057!1.35e-08!75;CL:0000055!6.19e-07!180 | |ontology_enrichment_celltype=CL:0000057!1.35e-08!75;CL:0000055!6.19e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.46e-11;5 | |ontology_enrichment_celltype_v019=CL:0000333;6.46e-11;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.04e-17;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.04e-17;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;3.02e-09;6 | |ontology_enrichment_disease_v019=DOID:169;3.02e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,3.14e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.16e-09!173;UBERON:0006601!1.16e-09!173;UBERON:0000073!2.59e-09!94;UBERON:0001016!2.59e-09!94;UBERON:0000153!2.87e-09!129;UBERON:0007811!2.87e-09!129;UBERON:0004121!9.04e-09!169;UBERON:0000475!3.26e-08!365;UBERON:0005743!3.70e-08!86;UBERON:0000033!5.35e-08!123;UBERON:0001017!6.51e-08!82;UBERON:0000955!1.80e-07!69;UBERON:0006238!1.80e-07!69 | |ontology_enrichment_uberon=UBERON:0000924!1.16e-09!173;UBERON:0006601!1.16e-09!173;UBERON:0000073!2.59e-09!94;UBERON:0001016!2.59e-09!94;UBERON:0000153!2.87e-09!129;UBERON:0007811!2.87e-09!129;UBERON:0004121!9.04e-09!169;UBERON:0000475!3.26e-08!365;UBERON:0005743!3.70e-08!86;UBERON:0000033!5.35e-08!123;UBERON:0001017!6.51e-08!82;UBERON:0000955!1.80e-07!69;UBERON:0006238!1.80e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.67e-26;2!UBERON:0002757;1.67e-26;2!UBERON:0010134;1.67e-26;2!UBERON:0005408;1.67e-26;2!UBERON:0001899;1.67e-26;2!UBERON:0003296;9.15e-14;4!UBERON:0010133;9.15e-14;4!UBERON:0002784;9.15e-14;4!UBERON:0000966;5.16e-11;5!UBERON:0005388;5.16e-11;5!UBERON:0001802;5.16e-11;5!UBERON:0000013;6.46e-11;5!UBERON:0002410;6.46e-11;5!UBERON:0001894;2.99e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.67e-26;2!UBERON:0002757;1.67e-26;2!UBERON:0010134;1.67e-26;2!UBERON:0005408;1.67e-26;2!UBERON:0001899;1.67e-26;2!UBERON:0003296;9.15e-14;4!UBERON:0010133;9.15e-14;4!UBERON:0002784;9.15e-14;4!UBERON:0000966;5.16e-11;5!UBERON:0005388;5.16e-11;5!UBERON:0001802;5.16e-11;5!UBERON:0000013;6.46e-11;5!UBERON:0002410;6.46e-11;5!UBERON:0001894;2.99e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.47e-26,2;UBERON:0002757,1.47e-26,2;UBERON:0010134,1.47e-26,2;UBERON:0005408,1.47e-26,2;UBERON:0001899,1.47e-26,2;UBERON:0003296,8.59e-14,4;UBERON:0010133,8.59e-14,4;UBERON:0002784,8.59e-14,4;UBERON:0000013,6.80e-11,5;UBERON:0002410,6.80e-11,5;UBERON:0000966,2.26e-09,6;UBERON:0005388,2.26e-09,6;UBERON:0001802,2.26e-09,6;UBERON:0001894,2.88e-08,7;UBERON:0006222,2.88e-08,7 | |||
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| ||
|short_description=p7@HR | |short_description=p7@HR | ||
}} | }} |
Latest revision as of 10:11, 17 September 2015
Short description: | p7@HR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HR_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 50bp_to_ENST00000518377_5end |
EntrezGene: | HR |
HGNC: | 5172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.47e-26 | 2 |
regional part of epithalamus | 1.47e-26 | 2 |
secretory circumventricular organ | 1.47e-26 | 2 |
circumventricular organ | 1.47e-26 | 2 |
epithalamus | 1.47e-26 | 2 |
gland of diencephalon | 8.59e-14 | 4 |
neuroendocrine gland | 8.59e-14 | 4 |
regional part of diencephalon | 8.59e-14 | 4 |
sympathetic nervous system | 6.80e-11 | 5 |
autonomic nervous system | 6.80e-11 | 5 |
retina | 2.26e-09 | 6 |
photoreceptor array | 2.26e-09 | 6 |
posterior segment of eyeball | 2.26e-09 | 6 |
diencephalon | 2.88e-08 | 7 |
future diencephalon | 2.88e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.14e-09 | 6 |